RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 PRF1P14222 555 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 RCC1P18754 421 aaPredicted RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 PSMB6P28072 239 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 CX3CR1P49238 355 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 EFNB2P52799 333 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 PCK2Q16822 640 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 WDR38Q5JTN6 314 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 TEX30Q5JUR7 227 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 EIF5AL1Q6IS14 154 aaKnown RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 KCTD18Q6PI47 426 aaPredicted RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 SLC16A13Q7RTY0 426 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 ZFP82Q8N141 532 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 BPIFB2Q8N4F0 458 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 ZNF676Q8N7Q3 588 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 BOLLQ8N9W6 283 aaKnown RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 ADAMTS17Q8TE56 1095 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 DVL3Q92997 716 aaPredicted RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 SMIM8Q96KF7 97 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 LOC102725191A0A1B0GVB3 256 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 METTL21EPA6NDL7 271 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 MFNGO00587 321 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 IGHG1P01857 330 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 CRHP06850 196 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 ZNF43P17038 809 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 SRD5A2P31213 254 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 CLRN1P58418 232 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 GFOD2Q3B7J2 385 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 BEX5Q5H9J7 111 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 TMEM244Q5VVB8 128 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 PAQR4Q8N4S7 273 aaPredicted RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 OR13C8Q8NGS7 320 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 OR6X1Q8NH79 312 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 PTX4Q96A99 478 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 SLC25A44Q96H78 314 aaPredicted RBP16.41■□□□□ 0.22
SPNS1-204ENST00000352260 PIGQQ9BRB3 760 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 ATG5Q9H1Y0 275 aa16.41■□□□□ 0.22
SPNS1-204ENST00000352260 C9orf170A2RU37 121 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 LRRC3CA6NJW4 275 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 CYB561P49447 251 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 RIDAP52758 137 aaKnown RBP16.4■□□□□ 0.22
SPNS1-204ENST00000352260 B3GALT5-AS1P59052 145 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 RSPO4Q2I0M5 234 aaPredicted RBP16.4■□□□□ 0.22
SPNS1-204ENST00000352260 MST1LQ2TV78 715 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 THEM4Q5T1C6 240 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 NAA40Q86UY6 237 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 LINC00346Q8IVM7 164 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 OR10AC1Q8NH08 325 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 TCTEX1D2Q8WW35 142 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 C11orf40Q8WZ69 217 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 RHOFQ9HBH0 211 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 MIOXQ9UGB7 285 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 IL17BQ9UHF5 180 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 LRP12Q9Y561 859 aa16.4■□□□□ 0.22
SPNS1-204ENST00000352260 STMND1H3BQB6 276 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 PNPP00491 289 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 FREM3P0C091 2139 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 LYL1P12980 280 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 RAC1P63000 192 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 H3F3AP84243 136 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 LRRC37A5PQ49AS3 106 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 CARD17Q5XLA6 110 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 UNQ6126/PRO20091Q6UXV3 157 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 DCXRQ7Z4W1 244 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 YRDCQ86U90 279 aaKnown RBP16.39■□□□□ 0.21
SPNS1-204ENST00000352260 DEFB124Q8NES8 71 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 ST7LQ8TDW4 575 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 TINAGL1Q9GZM7 467 aaPredicted RBP16.39■□□□□ 0.21
SPNS1-204ENST00000352260 CHMP1AQ9HD42 196 aaPredicted RBP16.39■□□□□ 0.21
SPNS1-204ENST00000352260 CYTL1Q9NRR1 136 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 DEPPQ9NTK1 212 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 DUS4LO95620 317 aaKnown RBP16.39■□□□□ 0.21
SPNS1-204ENST00000352260 F10P00742 488 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 ITGA5P08648 1049 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 PGAM2P15259 253 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 SRSF3P84103 164 aaKnown RBP16.39■□□□□ 0.21
SPNS1-204ENST00000352260 MFGE8Q08431 387 aaPredicted RBP16.39■□□□□ 0.21
SPNS1-204ENST00000352260 ODF4Q2M2E3 257 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 CORO6Q6QEF8 472 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 BIVMQ86UB2 503 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 DLL3Q9NYJ7 618 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 KPTNQ9Y664 436 aa16.39■□□□□ 0.21
SPNS1-204ENST00000352260 MED12Q93074 2177 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 A0A0J9YW62 118 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 MEIS3P1A6NDR6 274 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 CD5P06127 495 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 RFPL3SP0C7P2 107 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 LAP3P28838 519 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 TAS2R31P59538 309 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 ATXN7L3Q14CW9 347 aaPredicted RBP16.38■□□□□ 0.21
SPNS1-204ENST00000352260 SLC25A47Q6Q0C1 308 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 CATSPERDQ86XM0 798 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 ANGPTL5Q86XS5 388 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 OR10H5Q8NGA6 315 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 OR51A4Q8NGJ6 313 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 HIST1H2BAQ96A08 127 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 SEC22AQ96IW7 307 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 SLC22A13Q9Y226 551 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 DMRT1Q9Y5R6 373 aa16.38■□□□□ 0.21
SPNS1-204ENST00000352260 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
SPNS1-204ENST00000352260 DBX1A6NMT0 343 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms