RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HLXQ14774 488 aaPredicted RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 BHLHA15Q7RTS1 189 aaPredicted RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 ZNF649Q9BS31 505 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 FAAP24Q9BTP7 215 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 SLIRPQ9GZT3 109 aaKnown RBP12.12□□□□□ -0.47
SMC6-201ENST00000351948 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 SCPEP1Q9HB40 452 aa12.12□□□□□ -0.47
SMC6-201ENST00000351948 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 LALBAP00709 142 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 PCMT1P22061 227 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 PTGFRP43088 359 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 AKR1C1Q04828 323 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 MGAT2Q10469 447 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 FXNQ16595 210 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 PPP1R32Q7Z5V6 425 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 CNTD2Q9H8S5 307 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 TINAGQ9UJW2 476 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 LGALS8O00214 317 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 PMS2P2O95744 297 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 MRPL41Q8IXM3 137 aaKnown RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 OR4C16Q8NGL9 310 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 SLC25A31Q9H0C2 315 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 SLC26A1Q9H2B4 701 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 ABCD4O14678 606 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 FADS1O60427 444 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 IFNA1P01562 189 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 NGFRP08138 427 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 RPP30P78346 268 aaKnown RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 ESCO2Q56NI9 601 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 NCCRP1Q6ZVX7 275 aaPredicted RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 COMMD7Q86VX2 200 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 LGI3Q8N145 548 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 OR2AK2Q8NG84 335 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 DDOQ99489 341 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 RAB6AP20340 208 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 DDOSTP39656 456 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 LUMP51884 338 aaPredicted RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 FHL5Q5TD97 284 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 PRAMEF5Q5TYX0 476 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 PRAMEF6Q5VXH4 476 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 TRMT61AQ96FX7 289 aaKnown RBP12.11□□□□□ -0.47
SMC6-201ENST00000351948 RNF32Q9H0A6 362 aa12.11□□□□□ -0.47
SMC6-201ENST00000351948 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 ACP1P24666 158 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 DEGS2Q6QHC5 323 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 SLC16A12Q6ZSM3 486 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 FDCSPQ8NFU4 85 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 FOXJ3Q9UPW0 622 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 TBX6O95947 436 aaPredicted RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 RSPO4Q2I0M5 234 aaPredicted RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 CADM3Q8N126 398 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 ST7LQ8TDW4 575 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 ARL11Q969Q4 196 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 SPSB1Q96BD6 273 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 ANGPTL4Q9BY76 406 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 KCNJ16Q9NPI9 418 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 OR5V1Q9UGF6 321 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 KLHDC2Q9Y2U9 406 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 TMEM272A0A1B0GTI8 110 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 HEXAP06865 529 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 FGF9P31371 208 aaPredicted RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 SNRPNP63162 240 aaKnown RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 MICBQ29980 383 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 NLRC3Q7RTR2 1065 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 OR6K3Q8NGY3 331 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 LRRC29Q8WV35 223 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 SRRQ9GZT4 340 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 RIMS4Q9H426 269 aaPredicted RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 A0A1W2PPH5 198 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 XRCC3O43542 346 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 PTP4A3O75365 173 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 PLA2G7Q13093 441 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 ZNF674Q2M3X9 581 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
SMC6-201ENST00000351948 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 MSL2Q9HCI7 577 aa12.1□□□□□ -0.47
SMC6-201ENST00000351948 DEFA4P12838 97 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 IL3RAP26951 378 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 OPN3Q9H1Y3 402 aaPredicted RBP12.09□□□□□ -0.47
SMC6-201ENST00000351948 FN3KRPQ9HA64 309 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms