RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PLEKHN1Q494U1 663 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 OR2A2Q6IF42 318 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 LHFPL1Q86WI0 220 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 NAXDQ8IW45 347 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 CARFQ8N187 725 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 FAM89BQ8N5H3 189 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 DEFB123Q8N688 67 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF283Q8N7M2 679 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PXT1Q8NFP0 134 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 OR4A4PQ8NGN8 299 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 C15orf40Q8WUR7 153 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 RAB3CQ96E17 227 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 RBM24Q9BX46 236 aaKnown RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 DEFB126Q9BYW3 111 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 FGF23Q9GZV9 251 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 GPR173Q9NS66 373 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SHPKQ9UHJ6 478 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SIT1Q9Y3P8 196 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 R4GN57 208 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 CCDC187A0A096LP49 1063 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 B9A039 149 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 GPR31O00270 319 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ONECUT2O95948 504 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 APOC3P02656 99 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 CRHP06850 196 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SLC25A4P12235 298 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 TDGF1P13385 188 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 MGMTP16455 207 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 HLA-GP17693 338 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 MPZP25189 248 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PTGER4P35408 488 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 DLSTP36957 453 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PTGFRP43088 359 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SSBP1Q04837 148 aaKnown RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 IL15RAQ13261 267 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 TSPO2Q5TGU0 170 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF774Q6NX45 483 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 KLHL24Q6TFL4 600 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 THNSL2Q86YJ6 484 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 AKR7LQ8NHP1 331 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 TERB2Q8NHR7 220 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM54Q969K7 222 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF845Q96IR2 970 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SHDQ96IW2 340 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 UQCC2Q9BRT2 126 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 FAAP24Q9BTP7 215 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PDCD10Q9BUL8 212 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF471Q9BX82 626 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PECRQ9BY49 303 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 OSGIN2Q9Y236 505 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 POLR1DQ9Y2S0 133 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PTRH2Q9Y3E5 179 aaKnown RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PCDHGA1Q9Y5H4 931 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 MEGF11A6BM72 1044 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 FIGNL2A6NMB9 653 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 F8VVB4 439 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 F8VWA3 439 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ABCD4O14678 606 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 BCL2L11O43521 198 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 CELA3AP09093 270 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 LIFP15018 202 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 KCNMB1Q16558 191 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ETV3LQ6ZN32 361 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 TIPARPQ7Z3E1 657 aaKnown RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 GGNQ86UU5 652 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SLC51BQ86UW2 128 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PIGQQ9BRB3 760 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 HES7Q9BYE0 225 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SLC26A1Q9H2B4 701 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ACKR4Q9NPB9 350 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 SDHAF3Q9NRP4 125 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 MED9Q9NWA0 146 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF629Q9UEG4 869 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PCDHB10Q9UN67 800 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PIGLQ9Y2B2 252 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ASH1LQ9NR48 2969 aaKnown RBP5.26□□□□□ -1.57
CLCN3-201ENST00000347613 LOC102723996A0A087X1L8 192 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 MED19A0JLT2 244 aaPredicted RBP5.26□□□□□ -1.57
CLCN3-201ENST00000347613 DUS4LO95620 317 aaKnown RBP5.26□□□□□ -1.57
CLCN3-201ENST00000347613 GP1BAP07359 652 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 FCGR2AP12318 317 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 CCL2P13500 99 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF20P17024 532 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 GABRR1P24046 479 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 OPRM1P35372 400 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 SLC6A9P48067 706 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 SUMO3P55854 103 aaPredicted RBP5.26□□□□□ -1.57
CLCN3-201ENST00000347613 RPS27AP62979 156 aaKnown RBP5.26□□□□□ -1.57
CLCN3-201ENST00000347613 HIST1H3AP68431 136 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 RAB32Q13637 225 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 PIGYQ3MUY2 71 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 SP6Q3SY56 376 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 CLVS2Q5SYC1 327 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 HIST2H3PS2Q5TEC6 136 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM88Q6PEY1 159 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 DNM1P34Q6PK57 102 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 HIST2H3AQ71DI3 136 aa5.26□□□□□ -1.57
CLCN3-201ENST00000347613 PEG10Q86TG7 708 aaKnown RBP5.26□□□□□ -1.57
CLCN3-201ENST00000347613 PDZD9Q8IXQ8 264 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms