RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 THYN1Q9P016 225 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 AMDHD2Q9Y303 409 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 BCL2L11O43521 198 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 ANKRD34AQ69YU3 496 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 VASH2Q86V25 355 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 ARRDC1Q8N5I2 433 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 OR6S1Q8NH40 331 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 OR2A5Q96R48 311 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 TMIGD3P0DMS9 266 aaPredicted RBP20.69■□□□□ 0.9
NPAS3-201ENST00000346562 MPGP29372 298 aa20.69■□□□□ 0.9
NPAS3-201ENST00000346562 SEBOXQ9HB31 216 aaPredicted RBP20.69■□□□□ 0.9
NPAS3-201ENST00000346562 A0A0B4J2E0 115 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 A0A1B0GX12 115 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 hADV38S2A0JD32 116 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 CA6P23280 308 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 TMEM128Q5BJH2 165 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 A0A1W2PN81 502 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 CHRNA7P36544 502 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 LYG1Q8N1E2 194 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 OR4C16Q8NGL9 310 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 CMBLQ96DG6 245 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 MS4A18H0YCH9 400 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 EPXP11678 715 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 MS4A18Q3C1V0 323 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 CCL17Q92583 94 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 TMEM231Q9H6L2 316 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 ZFP64Q9NPA5 681 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 OR2B8PP59922 312 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 LRRTM1Q86UE6 522 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 GALNT16Q8N428 558 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 RAB1CQ92928 201 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 ADGRL4Q9HBW9 690 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 OR2M5A3KFT3 312 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 FAM3AP98173 230 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 SLC17A5Q9NRA2 495 aa20.68■□□□□ 0.9
NPAS3-201ENST00000346562 TNFSF14O43557 240 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 LRRC29Q8WV35 223 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 LURAP1Q96LR2 239 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 ICAM5Q9UMF0 924 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 DHRS3O75911 302 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 ZNF574Q6ZN55 896 aaPredicted RBP20.67■□□□□ 0.9
NPAS3-201ENST00000346562 SSX7Q7RTT5 188 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 CALHM3Q86XJ0 350 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 C10orf90Q96M02 699 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 CXXC4Q9H2H0 198 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 SPNS1Q9H2V7 528 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 MMP25Q9NPA2 562 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 GLRX2Q9NS18 164 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 A0A1W2PR80 420 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 HOXC4P09017 264 aaPredicted RBP20.67■□□□□ 0.9
NPAS3-201ENST00000346562 CDC14BO60729 498 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 FCGR3BO75015 233 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 CD3EP07766 207 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 SFTPA2Q8IWL1 248 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 SFTPA1Q8IWL2 248 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 UQCC2Q9BRT2 126 aa20.67■□□□□ 0.9
NPAS3-201ENST00000346562 NKX2-2O95096 273 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 EPHA8P29322 1005 aaPredicted RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 DCTDP32321 178 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 MNX1P50219 401 aaPredicted RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 TMEM18Q96B42 140 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 TMEM208Q9BTX3 173 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 CITO14578 2027 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 SMIM18P0DKX4 95 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 TAGLNQ01995 201 aaKnown RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PAX5Q02548 391 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PJVKQ0ZLH3 352 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 C11orf42Q8N5U0 333 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 IGHV1OR21-1A0A087WYE8 117 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 OR2W5A6NFC9 320 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 ZNF716A6NP11 495 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 B3GALNT1O75752 331 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PCBP3P57721 371 aaKnown RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PPP1CBP62140 327 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 UQCC1Q9NVA1 299 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 NRAPQ86VF7 1730 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 CDX4O14627 284 aaPredicted RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 GABRA1P14867 456 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 MMP15P51511 669 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 TPPP2P59282 170 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PRDM7Q9NQW5 492 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 R4GN57 208 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 PPM1DO15297 605 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 SLC25A5P05141 298 aaKnown RBP20.66■□□□□ 0.9
NPAS3-201ENST00000346562 HES3Q5TGS1 186 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 OR10D3Q8NH80 312 aa20.66■□□□□ 0.9
NPAS3-201ENST00000346562 OR3A4PP47883 348 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 DPF1Q92782 380 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 UCK1Q9HA47 277 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 SERTM1A2A2V5 107 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 COX7A1P24310 79 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 B4GALNT1Q00973 533 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 FZD5Q13467 585 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 YIPF6Q96EC8 236 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 SRRQ9GZT4 340 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 PSG11Q9UQ72 335 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 F5H697 171 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 RHOBP62745 196 aa20.65■□□□□ 0.9
NPAS3-201ENST00000346562 PRSS36Q5K4E3 855 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms