RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GNG3P63215 75 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 ACSM1Q08AH1 577 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 MAB21L1Q13394 359 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 RIN1Q13671 783 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 ZNF181Q2M3W8 571 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 MOGAT3Q86VF5 341 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 ZNF573Q86YE8 665 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 SERPINA12Q8IW75 414 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 MS4A15Q8N5U1 240 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 ZNF485Q8NCK3 441 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 OR5D14Q8NGL3 314 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 Q8TCH9 128 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 OR5P3Q8WZ94 311 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 GHSRQ92847 366 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 FGGYQ96C11 551 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 SOX7Q9BT81 388 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 ZNF275Q9NSD4 429 aaPredicted RBP10.01□□□□□ -0.81
SNCA-202ENST00000345009 PAK1IP1Q9NWT1 392 aaPredicted RBP10.01□□□□□ -0.81
SNCA-202ENST00000345009 IGHV4-30-2A0A087WSY4 118 aa10□□□□□ -0.81
SNCA-202ENST00000345009 hCG_1807616A0A1W2PRN6 198 aa10□□□□□ -0.81
SNCA-202ENST00000345009 H3BSH0 61 aa10□□□□□ -0.81
SNCA-202ENST00000345009 PLPP2O43688 288 aa10□□□□□ -0.81
SNCA-202ENST00000345009 RP2O75695 350 aa10□□□□□ -0.81
SNCA-202ENST00000345009 PTBP3O95758 552 aaKnown RBP10□□□□□ -0.81
SNCA-202ENST00000345009 CD1AP06126 327 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CD99P14209 185 aa10□□□□□ -0.81
SNCA-202ENST00000345009 FOSL1P15407 271 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CELP19835 753 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CD33P20138 364 aa10□□□□□ -0.81
SNCA-202ENST00000345009 PRKACBP22694 351 aa10□□□□□ -0.81
SNCA-202ENST00000345009 FUT6P51993 359 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CHN2P52757 468 aa10□□□□□ -0.81
SNCA-202ENST00000345009 GPR50Q13585 617 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CNN3Q15417 329 aaKnown RBP10□□□□□ -0.81
SNCA-202ENST00000345009 KCNJ8Q15842 424 aa10□□□□□ -0.81
SNCA-202ENST00000345009 YIF1BQ5BJH7 314 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CEP78Q5JTW2 689 aa10□□□□□ -0.81
SNCA-202ENST00000345009 TMEM42Q69YG0 159 aa10□□□□□ -0.81
SNCA-202ENST00000345009 DMKNQ6E0U4 476 aaPredicted RBP10□□□□□ -0.81
SNCA-202ENST00000345009 KRTAP1-3Q8IUG1 177 aa10□□□□□ -0.81
SNCA-202ENST00000345009 OR1M1Q8NGA1 313 aa10□□□□□ -0.81
SNCA-202ENST00000345009 ZNF671Q8TAW3 534 aa10□□□□□ -0.81
SNCA-202ENST00000345009 YIPF5Q969M3 257 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CPNE2Q96FN4 548 aaPredicted RBP10□□□□□ -0.81
SNCA-202ENST00000345009 CHST5Q9GZS9 411 aa10□□□□□ -0.81
SNCA-202ENST00000345009 ISYNA1Q9NPH2 558 aa10□□□□□ -0.81
SNCA-202ENST00000345009 UFSP2Q9NUQ7 469 aa10□□□□□ -0.81
SNCA-202ENST00000345009 TREM2Q9NZC2 230 aa10□□□□□ -0.81
SNCA-202ENST00000345009 RNF7Q9UBF6 113 aa10□□□□□ -0.81
SNCA-202ENST00000345009 HIVEP1P15822 2718 aa10□□□□□ -0.81
SNCA-202ENST00000345009 CSPG4Q6UVK1 2322 aa10□□□□□ -0.81
SNCA-202ENST00000345009 MED13LQ71F56 2210 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 CHD3Q12873 2000 aaKnown RBP9.99□□□□□ -0.81
SNCA-202ENST00000345009 DYSFO75923 2080 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 F8P00451 2351 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 IGHV3-64DA0A0J9YX35 117 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 LOC100289279A0A1B0GTE1 492 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 LRP5LA4QPB2 252 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 TRIM64A6NGJ6 449 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 TRIM64BA6NI03 449 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 A6NIN4 97 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 ZNF732B4DXR9 585 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 TMEM178BH3BS89 294 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 MAGEB3O15480 346 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 MT-ND2P03891 347 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 HSMCR30P0CW71 290 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 MAPK3P27361 379 aaPredicted RBP9.99□□□□□ -0.81
SNCA-202ENST00000345009 GPM6AP51674 278 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 LOXL1Q08397 574 aaPredicted RBP9.99□□□□□ -0.81
SNCA-202ENST00000345009 IRF3Q14653 427 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 FAM76BQ5HYJ3 339 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 UTS2BQ765I0 119 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 MUC20Q8N307 709 aaPredicted RBP9.99□□□□□ -0.81
SNCA-202ENST00000345009 FCGR1BQ92637 280 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 UFD1Q92890 307 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 DVL3Q92997 716 aaPredicted RBP9.99□□□□□ -0.81
SNCA-202ENST00000345009 C18orf12Q96KH6 178 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 BPESC1Q9GZL8 116 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 GPR173Q9NS66 373 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 C1orf123Q9NWV4 160 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 CKLFQ9UBR5 152 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 LRCH1Q9Y2L9 728 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 NPTNQ9Y639 398 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 AKAP9Q99996 3911 aa9.99□□□□□ -0.81
SNCA-202ENST00000345009 PNMA8CA0A1B0GUJ8 204 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ISPDA4D126 451 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 VWC2LB2RUY7 222 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 H7C1Q1 480 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 CDIPTO14735 213 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ALX3O95076 343 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 TNFAIP8O95379 198 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 FSTL3O95633 263 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 CPT2P23786 658 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 CFHR2P36980 270 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 MDH2P40926 338 aaKnown RBP9.98□□□□□ -0.81
SNCA-202ENST00000345009 ATP1B3P54709 279 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 BTG1P62324 171 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 TNP2Q05952 138 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ZNF154Q13106 437 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 TRAM1Q15629 374 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms