RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 A0A0A6YYC8 382 aaPredicted RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 I3L1I5 382 aaPredicted RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 NDUFS6O75380 124 aaKnown RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 HLA-DQB1P01920 261 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 CNN1P51911 297 aaKnown RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 ERV3-1Q14264 604 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 SLC25A30Q5SVS4 291 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 SLC6A18Q96N87 628 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 PPP1R3EQ9H7J1 279 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 IL2RGP31785 369 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 PTGER4P35408 488 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 NSDHLQ15738 373 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 H2BFWTQ7Z2G1 175 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 EXOGQ9Y2C4 368 aaKnown RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 TCRBV21S2A2A0A5A6 115 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 SFTPCP11686 197 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 ACVR1Q04771 509 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 Q96M85 177 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 TRAV36DV7A0A075B6V5 113 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 SERINC4A6NH21 518 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 IAPPP10997 89 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 ZNF468Q5VIY5 522 aaPredicted RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 ZNF813Q6ZN06 617 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 ZNF765Q7L2R6 523 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 GPR75O95800 540 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 FBLP22087 321 aaKnown RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 LAMTOR1Q6IAA8 161 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 FIGLAQ6QHK4 219 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 ORAI1Q96D31 301 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
TRIO-202ENST00000344204 LRIT1Q9P2V4 623 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 BRS3P32247 399 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 RIPPLY2Q5TAB7 128 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 GAGE10A6NGK3 116 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 GLB1P16278 677 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 RGRP47804 291 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 PSENENQ9NZ42 101 aa12.31□□□□□ -0.44
TRIO-202ENST00000344204 MFSD12Q6NUT3 480 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 SLC22A12Q96S37 553 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 PLEK2Q9NYT0 353 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 C17orf105B2RV13 164 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 SLC39A5Q6ZMH5 540 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 ADOQ96SZ5 270 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 GABRQQ9UN88 632 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 APBB3O95704 486 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 BMI1P35226 326 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 PAFAH1B2P68402 229 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 Q7L0L9 218 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 ANKRD30BLA7E2S9 258 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 SRP14P37108 136 aaKnown RBP12.3□□□□□ -0.44
TRIO-202ENST00000344204 NHLH1Q02575 133 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 C19orf47Q8N9M1 422 aaKnown RBP12.3□□□□□ -0.44
TRIO-202ENST00000344204 OR51H1Q8NH63 302 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 CPEB1Q9BZB8 566 aaKnown RBP12.3□□□□□ -0.44
TRIO-202ENST00000344204 TNFSF4P23510 183 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
TRIO-202ENST00000344204 SERPINE3A8MV23 424 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 OR5G3P0C626 314 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 NOVP48745 357 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 GPM6AP51674 278 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 DOK3Q7L591 496 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 TRIB1Q96RU8 372 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 PGA3P0DJD8 388 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 HOXC13P31276 330 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 IL13RA2Q14627 380 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 MMP21Q8N119 569 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 CD70P32970 193 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 GABREP78334 506 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 DOK5Q9P104 306 aa12.3□□□□□ -0.44
TRIO-202ENST00000344204 CLEC18AA5D8T8 446 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 K7EQM0 130 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 DNASE2O00115 360 aaPredicted RBP12.29□□□□□ -0.44
TRIO-202ENST00000344204 EDN1P05305 212 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 FABP2P12104 132 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 DCAF12L2Q5VW00 463 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 CLEC18CQ8NCF0 446 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 OR2AE1Q8NHA4 323 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 MARCH5Q9NX47 278 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 R4GMQ9 66 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 UBE2CO00762 179 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 ATRAIDQ6UW56 229 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 KREMEN2Q8NCW0 462 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 BMPR1BO00238 502 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 MT-ATP6P00846 226 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 TAS2R45P59539 299 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 NKAIN1Q4KMZ8 207 aa12.29□□□□□ -0.44
TRIO-202ENST00000344204 LY6G5CQ5SRR4 150 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms