RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CTSVO60911 334 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 EOMESO95936 686 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 RENP00797 406 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 ASGR1P07306 291 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 IL6RP08887 468 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 FBXO45P0C2W1 286 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 ALOX5APP20292 161 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 TLX1P31314 330 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 POLR2HP52434 150 aaKnown RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 FAM3BP58499 235 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 RBX1P62877 108 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 HIST1H3AP68431 136 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 IL13RA2Q14627 380 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 ANKRD55Q3KP44 614 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 TRMT12Q53H54 448 aaKnown RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM184AQ6ZMB5 413 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF793Q6ZN11 406 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 P4HA3Q7Z4N8 544 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 FAM185AQ8N0U4 392 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 CDRT4Q8N9R6 151 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 CPEB3Q8NE35 698 aaKnown RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 OR51A4Q8NGJ6 313 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 OR5L2Q8NGL0 311 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 OR5H2Q8NGV7 314 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 OR10AC1Q8NH08 325 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 WFDC5Q8TCV5 224 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 SLC25A43Q8WUT9 341 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF681Q96N22 645 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 GAL3ST4Q96RP7 486 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF2Q9BSG1 426 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 HIPK2Q9H2X6 1198 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 P4HTMQ9NXG6 502 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 FBLN5Q9UBX5 448 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 IL36AQ9UHA7 158 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 GPR34Q9UPC5 381 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 OSGIN2Q9Y236 505 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 DMXL1Q9Y485 3027 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 MYO15AQ9UKN7 3530 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 TRIP12Q14669 1992 aaPredicted RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 A0A087WV62 115 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 C20orf202A1L168 122 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 DHRS7CA6NNS2 312 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 GRM6O15303 877 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 ERI3O43414 337 aaKnown RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 BNIP3LO60238 219 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 SCAF4O95104 1147 aaKnown RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 TXNDC12O95881 172 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 CKMP06732 381 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 C8orf89P0DMQ9 161 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 FGF5P12034 268 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 CD52P31358 61 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 BRS3P32247 399 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 PPP1CCP36873 323 aaKnown RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 LTBRP36941 435 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 RPL29P47914 159 aaKnown RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 KLF3P57682 345 aaPredicted RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 RPS4XP62701 263 aaKnown RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 ZIC1Q15915 447 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 ITPRIPL2Q3MIP1 535 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 NKAIN1Q4KMZ8 207 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 NCR3LG1Q68D85 454 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 ABHD17CQ6PCB6 329 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 KCTD18Q6PI47 426 aaPredicted RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF705AQ6ZN79 300 aaPredicted RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 GRINAQ7Z429 371 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 APCDD1LQ8NCL9 501 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 CORO2AQ92828 525 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 EXTL1Q92935 676 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 SLC25A44Q96H78 314 aaPredicted RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 IL17FQ96PD4 163 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 OR8B4Q96RC9 309 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 C20orf144Q9BQM9 153 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 CABLES2Q9BTV7 478 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 G6PC3Q9BUM1 346 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 RAB11FIP5Q9BXF6 653 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 SMIM3Q9BZL3 60 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 FKBP11Q9NYL4 201 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 WSB2Q9NYS7 404 aaPredicted RBP7.21□□□□□ -1.25
ATG4A-201ENST00000343524 TAS2R4Q9NYW5 299 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 B3GALT5Q9Y2C3 310 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 KLHDC2Q9Y2U9 406 aa7.21□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1B0GU03 582 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 H0YL77 283 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 K7EP13 123 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 CIDEAO60543 219 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 DUSP11O75319 330 aaKnown RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 TMEM225BP0DP42 221 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 GRK6P43250 576 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 ALDH3B1P43353 468 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 GPR3P46089 330 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 SOX8P57073 446 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 CLDN2P57739 230 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 SELENOTP62341 195 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 VAMP2P63027 116 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 SUPT4H1P63272 117 aaKnown RBP7.21□□□□□ -1.26
ATG4A-201ENST00000343524 CSNK1G2P78368 415 aa7.21□□□□□ -1.26
ATG4A-201ENST00000343524 DUSP2Q05923 314 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms