RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 REG4Q9BYZ8 158 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 ULBP2Q9BZM5 246 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 ZNF224Q9NZL3 707 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
TPM3-208ENST00000341485 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 OR5H14A6NHG9 310 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 MFNGO00587 321 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 IFNA6P05013 189 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 DBHP09172 617 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 UBBP0CG47 229 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 OTX1P32242 354 aaPredicted RBP13.12□□□□□ -0.31
TPM3-208ENST00000341485 STARP49675 285 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 ZNF766Q5HY98 468 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
TPM3-208ENST00000341485 RGS7BPQ6MZT1 257 aaPredicted RBP13.12□□□□□ -0.31
TPM3-208ENST00000341485 HOGA1Q86XE5 327 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 OR56B1Q8NGI3 324 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 LRRC20Q8TCA0 184 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
TPM3-208ENST00000341485 RDH8Q9NYR8 311 aa13.12□□□□□ -0.31
TPM3-208ENST00000341485 LINC01387J3KSC0 135 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 EFSO43281 561 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 DHRS3O75911 302 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 HPNP05981 417 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FAHP16930 419 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 HLA-GP17693 338 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 MAGEA5P43359 124 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 CARD18P57730 90 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 KISS1Q15726 138 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 UBE2V2Q15819 145 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 PNLIPRP3Q17RR3 467 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FAHD2BQ6P2I3 314 aaPredicted RBP13.11□□□□□ -0.31
TPM3-208ENST00000341485 TMEM65Q6PI78 240 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 RFPL4BQ6ZWI9 263 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 ZNF546Q86UE3 836 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 TMEM178AQ8NBL3 297 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 MARCH1Q8TCQ1 289 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
TPM3-208ENST00000341485 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
TPM3-208ENST00000341485 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FAHD2AQ96GK7 314 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 SEC22AQ96IW7 307 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 PDCD10Q9BUL8 212 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 NARFLQ9H6Q4 476 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 M0R135 149 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 DLL1O00548 723 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 KLK10O43240 276 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 AKR1C4P17516 323 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 PTGFRP43088 359 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 ZNF84P51523 738 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 GFRA1P56159 465 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 RAC3P60763 192 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
TPM3-208ENST00000341485 IL13RA1P78552 427 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FGL1Q08830 312 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 Q6ZSR3 168 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.11□□□□□ -0.31
TPM3-208ENST00000341485 GGNQ86UU5 652 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 TMEM251Q8N6I4 163 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 OR2V1Q8NHB1 315 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 ZNF799Q96GE5 643 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 DMRTA2Q96SC8 542 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 URM1Q9BTM9 101 aaKnown RBP13.11□□□□□ -0.31
TPM3-208ENST00000341485 OR10A2Q9H208 303 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 RTTNQ86VV8 2226 aa13.11□□□□□ -0.31
TPM3-208ENST00000341485 ZNF292O60281 2723 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 FOXI3A8MTJ6 420 aaPredicted RBP13.1□□□□□ -0.31
TPM3-208ENST00000341485 DNPH1O43598 174 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 CELA3AP09093 270 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 NAT2P11245 290 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 SLC25A4P12235 298 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 SPINK2P20155 84 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 AGTR1P30556 359 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 PPIAP62937 165 aaKnown RBP13.1□□□□□ -0.31
TPM3-208ENST00000341485 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
TPM3-208ENST00000341485 VAX1Q5SQQ9 334 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 C11orf87Q6NUJ2 197 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 FAM89BQ8N5H3 189 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
TPM3-208ENST00000341485 OR51T1Q8NGJ9 327 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 PHB2Q99623 299 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 OCSTAMPQ9BR26 566 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 C1QTNF6Q9BXI9 259 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 PLEK2Q9NYT0 353 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 PIGLQ9Y2B2 252 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 MYO7BQ6PIF6 2116 aa13.1□□□□□ -0.31
TPM3-208ENST00000341485 MFSD2BA6NFX1 497 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 CXCL13O43927 109 aa13.09□□□□□ -0.31
TPM3-208ENST00000341485 SCO1O75880 301 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms