RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CASTOR1Q8WTX7 329 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 TRAF4Q9BUZ4 470 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 TMEM9BQ9NQ34 198 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 KCNAB3O43448 404 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 WISP2O76076 250 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 HLA-AP01891 365 aaKnown RBP20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 NR2C1P13056 603 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 MGMTP16455 207 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 AKR1C4P17516 323 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 CTSSP25774 331 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 EXOSC2Q13868 293 aaKnown RBP20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 WNT5BQ9H1J7 359 aa20.15■□□□□ 0.82
CLPTM1-201ENST00000337392 ARGFXA6NJG6 315 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 HIST1H1DP16402 221 aaKnown RBP20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 ATF4P18848 351 aaPredicted RBP20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 SORDQ00796 357 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 PPP1R1AQ13522 171 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 ESCO2Q56NI9 601 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 RAB12Q6IQ22 244 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 CPEB3Q8NE35 698 aaKnown RBP20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 OR1F12Q8NHA8 337 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 DYRK2Q92630 601 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 SPTSSAQ969W0 71 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 NUP50Q9UKX7 468 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 BOKQ9UMX3 212 aaPredicted RBP20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 V9GYS6 101 aa20.14■□□□□ 0.82
CLPTM1-201ENST00000337392 SPAARA0A1B0GVQ0 90 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 LEUTXA8MZ59 168 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 C3orf80F5H4A9 247 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 HTR3BO95264 441 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 CLDN18P56856 261 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 LY6G6FQ5SQ64 297 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 C6orf201Q7Z4U5 140 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 MARCH1Q8TCQ1 289 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 CHST5Q9GZS9 411 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 EMC3Q9P0I2 261 aa20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 NOSIPQ9Y314 301 aaKnown RBP20.14■□□□□ 0.81
CLPTM1-201ENST00000337392 OR2A4O95047 310 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 GIPP09681 153 aaPredicted RBP20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 PLGLB1Q02325 96 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 ECH1Q13011 328 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 NKAPLQ5M9Q1 402 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 KCNG3Q8TAE7 436 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 FBXW5Q969U6 566 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 OR2A7Q96R45 310 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 FAM173AQ9BQD7 235 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 DEFB127Q9H1M4 99 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 PCDHGA1Q9Y5H4 931 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 PLSCR5A0PG75 271 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 HLA-HP01893 362 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 BLVRBP30043 206 aaPredicted RBP20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 NPY4RP50391 375 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 ZNF92Q03936 586 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 ARFRP1Q13795 201 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 OR4K15Q8NH41 348 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 ST8SIA4Q92187 359 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 CRIM1Q9NZV1 1036 aa20.13■□□□□ 0.81
CLPTM1-201ENST00000337392 ZNF318Q5VUA4 2279 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 A0A0A6YYH2 397 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 A0A0U1RQV5 110 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 A6NJ64 397 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 TEX46H3BTG2 121 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 VAMP1P23763 118 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 PMP22Q01453 160 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 DEFB124Q8NES8 71 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 IGKV1D-8A0A087WSZ0 117 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 F5H5P2 479 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 CYTIPO60759 359 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 TRIP6Q15654 476 aaKnown RBP20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 STEAP2Q8NFT2 490 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 OR2H1Q9GZK4 316 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 PARD6AQ9NPB6 346 aa20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 NOP16Q9Y3C1 178 aaKnown RBP20.12■□□□□ 0.81
CLPTM1-201ENST00000337392 FAM25EA8MYX2 175 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 MRPL33O75394 65 aaKnown RBP20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 MELTFP08582 738 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 TMEM225BP0DP42 221 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 MTCP1P56278 107 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 RAB35Q15286 201 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 PABPC1L2AQ5JQF8 200 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 RNFT1Q5M7Z0 435 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 CPNE4Q96A23 557 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 OR10A2Q9H208 303 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 ZNF806P0C7X5 589 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 ATXN7L3Q14CW9 347 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 C12orf45Q8N5I9 185 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 SEMA6DQ8NFY4 1073 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 LRRC20Q8TCA0 184 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 GPR87Q9BY21 358 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 OR51B6Q9H340 312 aa20.11■□□□□ 0.81
CLPTM1-201ENST00000337392 POM121CA8CG34 1229 aa20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 M0R233 179 aa20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 HPNP05981 417 aa20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 SSBP1Q04837 148 aaKnown RBP20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 KCTD9Q7L273 389 aa20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 CPT1CQ8TCG5 803 aa20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 C12orf49Q9H741 205 aa20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 ZNF629Q9UEG4 869 aaPredicted RBP20.1■□□□□ 0.81
CLPTM1-201ENST00000337392 PIEZO2Q9H5I5 2752 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms