RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CTAGE4Q8IX94 777 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TUSC5Q8IXB3 177 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IFT20Q8IY31 132 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PEX5LQ8IYB4 626 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CLIP4Q8N3C7 705 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF664Q8N3J9 261 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 STPG2Q8N412 459 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OR2C3Q8N628 320 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RNF148Q8N7C7 305 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CCNYL1Q8N7R7 359 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 YIPF7Q8N8F6 280 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FNDC9Q8TBE3 224 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CCT6BQ92526 530 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC9A6Q92581 669 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CFAP36Q96G28 342 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RBM18Q96H35 190 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KIRREL1Q96J84 757 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PPP3R2Q96LZ3 170 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CHP1Q99653 195 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF649Q9BS31 505 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CHRDL1Q9BU40 450 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ST6GALNAC5Q9BVH7 336 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TMED9Q9BVK6 235 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OR51B6Q9H340 312 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 C5orf66Q9H5L9 145 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ANKZF1Q9H8Y5 726 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SPACA1Q9HBV2 294 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 WFDC1Q9HC57 220 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PNPOQ9NVS9 261 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PAK1IP1Q9NWT1 392 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TEX10Q9NXF1 929 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TAC3Q9UHF0 121 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZDHHC2Q9UIJ5 367 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 A3GALT2U3KPV4 340 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MAP1AP78559 2803 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LOC102724200A0A096LPH7 203 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IQCMA0A1B0GVH7 501 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TCRBV4S1A1TA0A5B7 111 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PSMB11A5LHX3 300 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ATP6V1G2-DDX39BF2Z307 99 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OVOL1O14753 267 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TSPAN4O14817 238 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MLNRO43193 412 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF254O75437 659 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CLN5O75503 358 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GPX5O75715 221 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SNAPC5O75971 98 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MPIG6BO95866 241 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SEMG1P04279 462 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ASAH2BP0C7U1 165 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IGHV4-30-4P0DP06 118 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IGLL1P15814 213 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FUT1P19526 365 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ATP6V1C1P21283 382 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PTBP1P26599 531 aaKnown RBP eCLIP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GABRB3P28472 473 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GCAP28676 217 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC1A2P43004 574 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 AP2S1P53680 142 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC12A2P55011 1212 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CLDN8P56748 225 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FGF12P61328 243 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TUBA1BP68363 451 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DR1Q01658 176 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RPL18AQ02543 176 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF117Q03924 483 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MLANAQ16655 118 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DUSP7Q16829 419 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PFKFB4Q16877 469 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 UGT3A2Q3SY77 523 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF385BQ569K4 471 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CLVS2Q5SYC1 327 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CCDC137Q6PK04 289 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SPINK6Q6UWN8 80 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HEPN1Q6WQI6 88 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LARP4Q71RC2 724 aaKnown RBP eCLIP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TUBA1AQ71U36 451 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 BTN2A1Q7KYR7 527 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ARPINQ7Z6K5 226 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZBTB46Q86UZ6 589 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC25A42Q86VD7 318 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ODF3L1Q8IXM7 274 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC7A5P1Q8MH63 180 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 Q8NAQ8 132 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SPATA4Q8NEY3 305 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 NOXO1Q8NFA2 376 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OR1L6Q8NGR2 347 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 BBS10Q8TAM1 723 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ENKURQ8TC29 256 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FAM120BQ96EK7 910 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FANCD2OSQ96PS1 177 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GAFA1Q96PS6 74 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FAM111AQ96PZ2 611 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ABHD14AQ9BUJ0 271 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 C6orf62Q9GZU0 229 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DSN1Q9H410 356 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OSGEPL1Q9H4B0 414 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms