RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GPR119Q8TDV5 335 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 DTD1Q8TEA8 209 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 CNTNAP3Q9BZ76 1288 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 UNC13CQ8NB66 2214 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 PRAMEF26H0Y7S4 382 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 C1QL1O75973 258 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF708P17019 499 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 GABRG2P18507 467 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 NDUFA6P56556 154 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF529Q6P280 563 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 SLC26A10Q8NG04 563 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 OR5D18Q8NGL1 313 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 OR13G1Q8NGZ3 307 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 SLAMF9Q96A28 289 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 NEU1Q99519 415 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 PBOV1Q9GZY1 135 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF701Q9NV72 531 aaPredicted RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 B3GALT5Q9Y2C3 310 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 TTRP02766 147 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 GSTP1P09211 210 aaKnown RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 CD37P11049 281 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 OR3A4PP47883 348 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 QRFPP83859 136 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 CHRFAM7AQ494W8 412 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF383Q8NA42 475 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 FAM71F1Q96KD3 344 aaPredicted RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 PRDM6Q9NQX0 595 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 LUZP4Q9P127 313 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 MMP24Q9Y5R2 645 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 BDP1A6H8Y1 2624 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 FAM157AC9JC47 383 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 RAD51DO75771 328 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 OR2C1O95371 312 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 LYL1P12980 280 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 C14orf28Q4W4Y0 310 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 OPN5Q6U736 354 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 ABHD12BQ7Z5M8 362 aaPredicted RBP12.15□□□□□ -0.46
SYNE3-201ENST00000334258 PRSS58Q8IYP2 241 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 SEMA6DQ8NFY4 1073 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 OR13H1Q8NG92 308 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 MFSD8Q8NHS3 518 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 C5orf34Q96MH7 638 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 PRRX2Q99811 253 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 MED29Q9NX70 200 aa12.15□□□□□ -0.46
SYNE3-201ENST00000334258 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 PLPP3O14495 311 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 SNCAP37840 140 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 SLC26A5P58743 744 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 TMEM268Q5VZI3 342 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 Q6ZSR6 202 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 HSD17B11Q8NBQ5 300 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 NPRL2Q8WTW4 380 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 SLAMF6Q96DU3 332 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 TAAR9Q96RI9 348 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 PIGQQ9BRB3 760 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 C1orf123Q9NWV4 160 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 A0A0A6YYD4 124 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 A8MVM7 634 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 TMEM14DPA8MWL7 114 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 H7C1Q1 480 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 SRSF10O75494 262 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 NSA2O95478 260 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 POU2F2P09086 479 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 HHEXQ03014 270 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 SSPNQ14714 243 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 URM1Q9BTM9 101 aaKnown RBP12.14□□□□□ -0.47
SYNE3-201ENST00000334258 EMC6Q9BV81 110 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 CRLF2Q9HC73 371 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 SLC2A4RGQ9NR83 387 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 CLDN16Q9Y5I7 305 aa12.14□□□□□ -0.47
SYNE3-201ENST00000334258 BORCS7-ASMTA0A0B4J1R7 106 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 DXOO77932 396 aaKnown RBP12.13□□□□□ -0.47
SYNE3-201ENST00000334258 GIMD1P0DJR0 217 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 IL11P20809 199 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 MMP16P51512 607 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 GKN2Q86XP6 184 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 SOHLH2Q9NX45 425 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 RHBDD3Q9Y3P4 386 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
SYNE3-201ENST00000334258 CDC14BO60729 498 aa12.13□□□□□ -0.47
SYNE3-201ENST00000334258 POLR2HP52434 150 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms