RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 NPIPB4C9JG80 1138 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 RER1O15258 196 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 NME2P1O60361 137 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 CLRN1P58418 232 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 ACY1Q03154 408 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 ZNF616Q08AN1 781 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 TSC22D1Q15714 1073 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 MIDNQ504T8 468 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 CARD17Q5XLA6 110 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 FAM57BQ71RH2 274 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 ST8SIA1Q92185 356 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 DDIT4LQ96D03 193 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 VN1R1Q9GZP7 353 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 SLC2A4RGQ9NR83 387 aa20.8■□□□□ 0.92
TSKU-201ENST00000333090 IGKV1-9A0A0C4DH69 117 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 FBLP22087 321 aaKnown RBP20.79■□□□□ 0.92
TSKU-201ENST00000333090 RNF212Q495C1 297 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 TMPRSS9Q7Z410 1059 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 PRRX2Q99811 253 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 AMDHD2Q9Y303 409 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 A0A1W2PPH5 198 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 ANKUB1A6NFN9 424 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 GAPDHP04406 335 aaKnown RBP20.79■□□□□ 0.92
TSKU-201ENST00000333090 HPNP05981 417 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 APOBEC1P41238 236 aaKnown RBP20.79■□□□□ 0.92
TSKU-201ENST00000333090 POLR2GP62487 172 aaKnown RBP eCLIP20.79■□□□□ 0.92
TSKU-201ENST00000333090 FAM189A2Q15884 450 aa20.79■□□□□ 0.92
TSKU-201ENST00000333090 LILRA5A6NI73 299 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 LIPT2A6NK58 231 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 DEDDO75618 318 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 AGAP20933 346 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 LTBRP36941 435 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 GABREP78334 506 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 IGSF11Q5DX21 431 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 LURAP1LQ8IV03 231 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 TPSD1Q9BZJ3 242 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 C8orf33Q9H7E9 229 aaPredicted RBP20.78■□□□□ 0.92
TSKU-201ENST00000333090 GPR27Q9NS67 375 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 B3GAT1Q9P2W7 334 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 hCG_1809904A0A1W2PP81 198 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 A0A1W2PR64 198 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 A0A1W2PRV1 198 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 VSTM2BA6NLU5 285 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 SERPINA2P20848 420 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 HMGN3Q15651 99 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 THEM4Q5T1C6 240 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 OPN5Q6U736 354 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 GKN2Q86XP6 184 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 ERGIC1Q969X5 290 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 MRPL13Q9BYD1 178 aaKnown RBP20.78■□□□□ 0.92
TSKU-201ENST00000333090 EIF5A2Q9GZV4 153 aaKnown RBP20.78■□□□□ 0.92
TSKU-201ENST00000333090 SPACA1Q9HBV2 294 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 CNTRLQ7Z7A1 2325 aa20.78■□□□□ 0.92
TSKU-201ENST00000333090 ARL4DP49703 201 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 ZNF283Q8N7M2 679 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 SEMA6DQ8NFY4 1073 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 RSRP1Q9BUV0 290 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 FAM212BQ9NTI7 297 aaPredicted RBP20.77■□□□□ 0.92
TSKU-201ENST00000333090 GHRLQ9UBU3 117 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 STARD10Q9Y365 291 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 ASXL3Q9C0F0 2248 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 NAT2P11245 290 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 SULF2Q8IWU5 870 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 LYPD6BQ8NI32 183 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 MRPL24Q96A35 216 aaKnown RBP20.77■□□□□ 0.92
TSKU-201ENST00000333090 ZNF2Q9BSG1 426 aaPredicted RBP20.77■□□□□ 0.92
TSKU-201ENST00000333090 PECRQ9BY49 303 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 ELL3Q9HB65 397 aaPredicted RBP20.77■□□□□ 0.92
TSKU-201ENST00000333090 MED12Q93074 2177 aa20.77■□□□□ 0.92
TSKU-201ENST00000333090 IGKV1D-8A0A087WSZ0 117 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 H3BMH7 237 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 ACKR3P25106 362 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 SNCAP37840 140 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 CCR5P51681 352 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 FAM3AP98173 230 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 C17orf67Q0P5P2 114 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 KISS1Q15726 138 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 SGPP2Q8IWX5 399 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 FAM89BQ8N5H3 189 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 RAB33BQ9H082 229 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 ALKBH4Q9NXW9 302 aa20.77■□□□□ 0.91
TSKU-201ENST00000333090 MYO7BQ6PIF6 2116 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 TXNL1O43396 289 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 THBS4P35443 961 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 FHITP49789 147 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 SURF2Q15527 256 aaPredicted RBP20.76■□□□□ 0.91
TSKU-201ENST00000333090 GUK1Q16774 197 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 GGNBP1Q5YKI7 109 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 OR1L3Q8NH93 324 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 MVB12AQ96EY5 273 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 LIN37Q96GY3 246 aaPredicted RBP20.76■□□□□ 0.91
TSKU-201ENST00000333090 KLHL13Q9P2N7 655 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 SHISA7A6NL88 538 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 STMND1H3BQB6 276 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 IFNA21P01568 189 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 GLP1RP43220 463 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 RNF4P78317 190 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 UEVLDQ8IX04 471 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 ZDHHC12Q96GR4 267 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms