RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SPRY1O43609 319 aaPredicted RBP13.89□□□□□ -0.19
PDGFB-201ENST00000331163 GRPP07492 148 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
PDGFB-201ENST00000331163 PTBP1P26599 531 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDGFB-201ENST00000331163 CCR9P51686 369 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 GFRA1P56159 465 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 SORDQ00796 357 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 RAB11BQ15907 218 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 LINC00303Q3SY05 128 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 RNLSQ5VYX0 342 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 OR2T2Q6IF00 324 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 OR5D14Q8NGL3 314 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 C2CD4CQ8TF44 421 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 SNRNP40Q96DI7 357 aaKnown RBP13.89□□□□□ -0.19
PDGFB-201ENST00000331163 MUCL1Q96DR8 90 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 ADAT1Q9BUB4 502 aaKnown RBP13.89□□□□□ -0.19
PDGFB-201ENST00000331163 UBE2QL1A1L167 161 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 NGFP01138 241 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 SELEP16581 610 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF708P17019 499 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 PSG4Q00888 419 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 MALLQ13021 153 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 NKPD1Q17RQ9 610 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 SCGB2B2Q4G0G5 96 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 C4orf46Q504U0 113 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 TMED4Q7Z7H5 227 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 ZFP82Q8N141 532 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 WDYHV1Q96HA8 205 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 ADAM10O14672 748 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 DKK1O94907 266 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ACTL6AO96019 429 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 RAB3AP20336 220 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ACHEP22303 614 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 S100A11P31949 105 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 DMKNQ6E0U4 476 aaPredicted RBP13.88□□□□□ -0.19
PDGFB-201ENST00000331163 TMUB2Q71RG4 321 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 PNLDC1Q8NA58 520 aaKnown RBP13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF485Q8NCK3 441 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 OR1F12Q8NHA8 337 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ISYNA1Q9NPH2 558 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 OBP2BQ9NPH6 170 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 MSRB2Q9Y3D2 182 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 OR4C45A6NMZ5 311 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 PLPP2O43688 288 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 MTRF1O75570 445 aaKnown RBP13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF205O95201 554 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 SNAI3Q3KNW1 292 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 SLC25A30Q5SVS4 291 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 METTL11BQ5VVY1 283 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 C20orf196Q8IYI0 205 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 PRR18Q8N4B5 295 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 MAFIPQ8WZ33 124 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 CMBLQ96DG6 245 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 BORCS8Q96FH0 119 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 S100A16Q96FQ6 103 aaKnown RBP13.88□□□□□ -0.19
PDGFB-201ENST00000331163 REEP6Q96HR9 211 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 C12orf57Q99622 126 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 TMEM38BQ9NVV0 291 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 HAO2Q9NYQ3 351 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 MED12LQ86YW9 2145 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 MFSD2BA6NFX1 497 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 FAM25EA8MYX2 175 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 EGR3Q06889 387 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF611Q8N823 705 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 RNF128Q8TEB7 428 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF701Q9NV72 531 aaPredicted RBP13.88□□□□□ -0.19
PDGFB-201ENST00000331163 CYB5R1Q9UHQ9 305 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 ST6GALNAC2Q9UJ37 374 aa13.88□□□□□ -0.19
PDGFB-201ENST00000331163 KRBOX1C9JBD0 128 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 H7C2Y5 167 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 GPRIN2O60269 458 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 TXNDC12O95881 172 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 GSG1LQ6UXU4 331 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 LINC00518Q8N0U6 118 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 OIT3Q8WWZ8 545 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 GPN1Q9HCN4 374 aaPredicted RBP13.87□□□□□ -0.19
PDGFB-201ENST00000331163 USP9YO00507 2555 aaPredicted RBP13.87□□□□□ -0.19
PDGFB-201ENST00000331163 MCRIP1C9JLW8 97 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 CELA3BP08861 270 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF93P35789 620 aaPredicted RBP13.87□□□□□ -0.19
PDGFB-201ENST00000331163 PCBD1P61457 104 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 ZP4Q12836 540 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 GK2Q14410 553 aaPredicted RBP13.87□□□□□ -0.19
PDGFB-201ENST00000331163 NHLRC3Q5JS37 347 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 FCAMRQ8WWV6 532 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 JAM3Q9BX67 310 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 ACTR6Q9GZN1 396 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 IGLV3-32A0A0A0MS00 114 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF716A6NP11 495 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 EPXP11678 715 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 FAM27E3Q08E93 113 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 RNPS1Q15287 305 aaKnown RBP13.87□□□□□ -0.19
PDGFB-201ENST00000331163 LIPHQ8WWY8 451 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 ADAT3Q96EY9 351 aaPredicted RBP13.87□□□□□ -0.19
PDGFB-201ENST00000331163 DMRTA2Q96SC8 542 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 MFFQ9GZY8 342 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 SHARPINQ9H0F6 387 aa13.87□□□□□ -0.19
PDGFB-201ENST00000331163 MED19A0JLT2 244 aaPredicted RBP13.86□□□□□ -0.19
PDGFB-201ENST00000331163 ATG12O94817 140 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms