RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RASL10BQ96S79 203 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 RHOFQ9HBH0 211 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 GPR27Q9NS67 375 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 H3BMH7 237 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 NME2P1O60361 137 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 S100A6P06703 90 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 CPT2P23786 658 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 CCL7P80098 99 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF441Q8N8Z8 693 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 HSD17B11Q8NBQ5 300 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 OR5L1Q8NGL2 311 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SPACA9Q96E40 222 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 PHYHIPLQ96FC7 376 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 FAAP24Q9BTP7 215 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SLC2A8Q9NY64 477 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 GPR132Q9UNW8 380 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SNAPINO95295 136 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 IGLV3-19P01714 112 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 MSR1P21757 451 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 ZP4Q12836 540 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 Q6ZRG5 221 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SUMF1Q8NBK3 374 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 CD300LFQ8TDQ1 290 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SLC39A7Q92504 469 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 C2orf50Q96LR7 162 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SULT4A1Q9BR01 284 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 RPS10P5Q9NQ39 176 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 HPNP05981 417 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 MELTFP08582 738 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 SNRNP70P08621 437 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 TBPP20226 339 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 FPR2P25090 351 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 FCGR2CP31995 323 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 EIF5AP63241 154 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 STK11Q15831 433 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 ACTBL2Q562R1 376 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 KRBOX4Q5JUW0 171 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 GJC3Q8NFK1 279 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 OR10Z1Q8NGY1 313 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 POC1BQ8TC44 478 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 TMEM230Q96A57 120 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 REEP6Q96HR9 211 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 ALKBH3Q96Q83 286 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 MOB1AQ9H8S9 216 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 IGKV1-9A0A0C4DH69 117 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 HSPB6O14558 160 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 NXPH3O95157 252 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 IFNA2P01563 188 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 RPL12P30050 165 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 FAM189A2Q15884 450 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 BORCS8Q96FH0 119 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 RNF126Q9BV68 326 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF442Q9H7R0 627 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 FER1L5A0AVI2 2057 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 TSPAN15O95858 294 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 IL2RAP01589 272 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 OMGP23515 440 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF84P51523 738 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 SLC35A1P78382 337 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 PRSS54Q6PEW0 395 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 YRDCQ86U90 279 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 AKR7LQ8NHP1 331 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF107Q9UII5 783 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 KCNIP3Q9Y2W7 256 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 SHANK1Q9Y566 2161 aa11.34□□□□□ -0.59
HMGCS1-201ENST00000325110 E9PLN8 166 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 MBTPS2O43462 519 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 KLK3P07288 261 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 OR5H8P0DN80 308 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 SUMO3P55854 103 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 GRB2P62993 217 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 PECRQ9BY49 303 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 UQCC1Q9NVA1 299 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 C1orf123Q9NWV4 160 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 PURGQ9UJV8 347 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 PRELID3BQ9Y3B1 194 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 TNFSF11O14788 317 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 SIGLEC6O43699 453 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 MSX1P28360 303 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 P2RY4P51582 365 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 FAHD2BQ6P2I3 314 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 RAB11FIP2Q7L804 512 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 PIGCQ92535 297 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 FAHD2AQ96GK7 314 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 AKR1E2Q96JD6 320 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 CCDC74BQ96LY2 380 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 RAB18Q9NP72 206 aa11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 MYOZ1Q9NP98 299 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 PRRC2CQ9Y520 2896 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-201ENST00000325110 OR7C1O76099 320 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 B4GALT1P15291 398 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 PIGPP57054 158 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 FLI1Q01543 452 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms