RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MOKQ9UQ07 419 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 F5H697 171 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 SPRY1O43609 319 aaPredicted RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 CRYAAP02489 173 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 HIST1H1CP16403 213 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 ABCD3P28288 659 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 PTRH1Q86Y79 214 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR6S1Q8NH40 331 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 STARD4Q96DR4 205 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR2W5A6NFC9 320 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 SHISA7A6NL88 538 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 CST5P28325 142 aaPredicted RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 MEOX1P50221 254 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 PPIAP62937 165 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 GAMTQ14353 236 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 FAM209AQ5JX71 171 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 LIPNQ5VXI9 398 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TMEM81Q6P7N7 255 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 DRAM2Q6UX65 266 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 GMLQ99445 158 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 MS4A8Q9BY19 250 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 C20orf141Q9NUB4 165 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 GALR2O43603 387 aaPredicted RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 RBP4P02753 201 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 SPINK2P20155 84 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 FAM162BQ5T6X4 162 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 C6orf15Q6UXA7 325 aaPredicted RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 DRGXA6NNA5 263 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 EIF1BO60739 113 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 EN2P19622 333 aaPredicted RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 TUSC1Q2TAM9 212 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 LAIR1Q6GTX8 287 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 NDFIP1Q9BT67 221 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 NDRG4Q9ULP0 352 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 GOSR1O95249 250 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 GNG10P50151 68 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 CNN1P51911 297 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 PELI3Q8N2H9 469 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 NKAIN3Q8N8D7 197 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR2D3Q8NGH3 330 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR4D10Q8NGI6 311 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 SEC11CQ9BY50 192 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 DUSP22Q9NRW4 184 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TRGV8A0A0C4DH27 118 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 FCN1O00602 326 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 NRASP01111 189 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 CD1EP15812 388 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 NKAIN1Q4KMZ8 207 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 MOB3BQ86TA1 216 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR5M9Q8NGP3 310 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TRBV23-1A0A0A0MS06 115 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TLCD2A6NGC4 264 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 SHISA8B8ZZ34 492 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 ADAM20O43506 726 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 FAM209BQ5JX69 171 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 DGAT2L6Q6ZPD8 337 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 IGKV6-21A0A0C4DH24 114 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 DEFB108AA8MXU0 73 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 AP4M1O00189 453 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 IGF2P01344 180 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TRMT12Q53H54 448 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR4A47Q6IF82 309 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 ACSM6Q6P461 480 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 FER1L6-AS2Q96M78 137 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 GAL3ST2Q9H3Q3 398 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 NPY1RP25929 384 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 SELENOPP49908 381 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 FBXO46Q6PJ61 603 aaPredicted RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 C6orf106Q9H6K1 298 aaPredicted RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 A0A1B0GX78 115 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CDAP32320 146 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 EVX1P49640 407 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 MAMSTRQ6ZN01 415 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 ASB1Q9Y576 335 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 RICTORQ6R327 1708 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 GLB1P16278 677 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 ATF1P18846 271 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 COMPP49747 757 aaPredicted RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 TMEM116Q8NCL8 245 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 FIZ1Q96SL8 496 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 KCNK15Q9H427 330 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 LEUTXA8MZ59 168 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CTSLP07711 333 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 PFN3P60673 137 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 FAM109BQ6ICB4 259 aaPredicted RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 IL21Q9HBE4 155 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 MED29Q9NX70 200 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 RALYQ9UKM9 306 aaKnown RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 TUBAL3A6NHL2 446 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 IGHV3-13P01766 116 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 IGHV3-7P01780 117 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 RPL27P61353 136 aaKnown RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 B3GNTL1Q67FW5 361 aaPredicted RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 J3KRW8 73 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 BTG2P78543 158 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 RAB18Q9NP72 206 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CASP8AP2Q9UKL3 1982 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 SNRPGP15A8MWD9 76 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms