RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RHPN2P1A8MT19 583 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 ZNF878C9JN71 531 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 DAP3P51398 398 aaKnown RBP15.78■□□□□ 0.12
PRKCB-202ENST00000321728 TDGQ13569 410 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 OR5D18Q8NGL1 313 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 RHBDD1Q8TEB9 315 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 MRPL24Q96A35 216 aaKnown RBP15.78■□□□□ 0.12
PRKCB-202ENST00000321728 KCNK17Q96T54 332 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 ZNF701Q9NV72 531 aaPredicted RBP15.78■□□□□ 0.12
PRKCB-202ENST00000321728 TREM2Q9NZC2 230 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 S100A2P29034 98 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 GALNSP34059 522 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 ACY1Q03154 408 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 GGNBP1Q5YKI7 109 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 SULF2Q8IWU5 870 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 SGPP2Q8IWX5 399 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 GNRHR2Q96P88 292 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 POLR1DQ9Y2S0 133 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 SLCO1B1Q9Y6L6 691 aa15.78■□□□□ 0.12
PRKCB-202ENST00000321728 BORCS7-ASMTA0A0B4J1R7 106 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 B4DGG1 531 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 TMEM150CB9EJG8 249 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 NDUFA6P56556 154 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 SLC35A1P78382 337 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 PYY3Q5JQD4 70 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 OR10S1Q8NGN2 331 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 PBDC1Q9BVG4 233 aa15.77■□□□□ 0.12
PRKCB-202ENST00000321728 SLC34A2O95436 690 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 KLK3P07288 261 aaPredicted RBP15.77■□□□□ 0.11
PRKCB-202ENST00000321728 SEC11BP0C7V7 166 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 ITGA3P26006 1051 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 RPS23P62266 143 aaKnown RBP15.77■□□□□ 0.11
PRKCB-202ENST00000321728 RAB1AP62820 205 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 HIST2H3AQ71DI3 136 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 DAZLQ92904 295 aaKnown RBP15.77■□□□□ 0.11
PRKCB-202ENST00000321728 C5orf34Q96MH7 638 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 PLEKHA2Q9HB19 425 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 GPR84Q9NQS5 396 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 TUBD1Q9UJT1 453 aa15.77■□□□□ 0.11
PRKCB-202ENST00000321728 GIMD1P0DJR0 217 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 HOXA5P20719 270 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 BLVRBP30043 206 aaPredicted RBP15.76■□□□□ 0.11
PRKCB-202ENST00000321728 AKT2P31751 481 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 ZNF383Q8NA42 475 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 SEMA6DQ8NFY4 1073 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 SH3BGRL3Q9H299 93 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 SOHLH2Q9NX45 425 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 MMP24Q9Y5R2 645 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 FTCDNL1E5RQL4 147 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 FOSL1P15407 271 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 GPX4P36969 197 aaPredicted RBP15.76■□□□□ 0.11
PRKCB-202ENST00000321728 TNFRSF4P43489 277 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 UCP2P55851 309 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 HSF1Q00613 529 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 TLE3Q04726 772 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 FAM189A2Q15884 450 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 C14orf28Q4W4Y0 310 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 SOHLH1Q5JUK2 328 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 HEPN1Q6WQI6 88 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 C1QL4Q86Z23 238 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 SLC22A18ASQ8N1D0 253 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 HSD17B11Q8NBQ5 300 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 ZNF721Q8TF20 911 aa15.76■□□□□ 0.11
PRKCB-202ENST00000321728 ZNF2Q9BSG1 426 aaPredicted RBP15.76■□□□□ 0.11
PRKCB-202ENST00000321728 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.76■□□□□ 0.112e-7■■■■■ 28.8
PRKCB-202ENST00000321728 DDAH2O95865 285 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 IGKV3-11P04433 115 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 CTSEP14091 401 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 CHATP28329 748 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 OR1D4P47884 311 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 YPEL5P62699 121 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 CLINT1Q14677 625 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 SURF2Q15527 256 aaPredicted RBP15.75■□□□□ 0.11
PRKCB-202ENST00000321728 CDPF1Q6NVV7 123 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 TMEM156Q8N614 296 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 MFSD8Q8NHS3 518 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 NPRL2Q8WTW4 380 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 TCTN2Q96GX1 697 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 MRGPRX1Q96LB2 322 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 GABRG3Q99928 467 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 MESP1Q9BRJ9 268 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 NUDT22Q9BRQ3 303 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 WFDC1Q9HC57 220 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 HDGFL3Q9Y3E1 203 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 A0A1W2PQD3 144 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 E5RGE8 158 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 MASP2O00187 686 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 XRCC2O43543 280 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 TSPAN2O60636 221 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 CDX1P47902 265 aaPredicted RBP15.75■□□□□ 0.11
PRKCB-202ENST00000321728 BIDP55957 195 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 H1FNTQ75WM6 255 aaPredicted RBP15.75■□□□□ 0.11
PRKCB-202ENST00000321728 C9orf40Q8IXQ3 194 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 PRSS58Q8IYP2 241 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 SUMF2Q8NBJ7 301 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 TGM7Q96PF1 710 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 LANCL2Q9NS86 450 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 NSG2Q9Y328 171 aa15.75■□□□□ 0.11
PRKCB-202ENST00000321728 C2orf72A6NCS6 295 aa15.74■□□□□ 0.11
PRKCB-202ENST00000321728 DIRAS3O95661 229 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms