RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SGCDQ92629 289 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 SEH1LQ96EE3 360 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 HIST1H2AAQ96QV6 131 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 PATZ1Q9HBE1 687 aaKnown RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 ABCB9Q9NP78 766 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 FKBP14Q9NWM8 211 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 CAB39Q9Y376 341 aaPredicted RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 PCDHGB5Q9Y5G0 923 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 SIRT4Q9Y6E7 314 aaPredicted RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 DHRS7CA6NNS2 312 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 CEACAM18A8MTB9 384 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 B4DSR2 109 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 LALBAP00709 142 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 ISG15P05161 165 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 PIPP12273 146 aaPredicted RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 MYF6P23409 242 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 DOC2BQ14184 412 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 ZNF404Q494X3 552 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 CLVS2Q5SYC1 327 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 TMEM244Q5VVB8 128 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 OR5A2Q8NGI9 324 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 LRRC29Q8WV35 223 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 GATAD2BQ8WXI9 593 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 ADAT3Q96EY9 351 aaPredicted RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 ANKRD60Q9BZ19 345 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 OR51I2Q9H344 312 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 CNOT2Q9NZN8 540 aaKnown RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 PCDHB10Q9UN67 800 aa13.9□□□□□ -0.18
LRRC42-201ENST00000319223 EXOSC1Q9Y3B2 195 aaKnown RBP13.9□□□□□ -0.18
LRRC42-201ENST00000319223 NIPBLQ6KC79 2804 aaeCLIP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 SONP18583 2426 aaKnown RBP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 NF1P21359 2839 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.89□□□□□ -0.191e-7■■■■■ 34.8
LRRC42-201ENST00000319223 ANK3Q12955 4377 aaKnown RBP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 SETD2Q9BYW2 2564 aaPredicted RBP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 EFCAB10A6NFE3 127 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 PLPP2O43688 288 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 RHBDL1O75783 438 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 ZFPL1O95159 310 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 ZFP36P26651 326 aaKnown RBP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 GBX2P52951 348 aaPredicted RBP13.89□□□□□ -0.19
LRRC42-201ENST00000319223 UBE2V2Q15819 145 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 FAM166AQ6J272 317 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 EGFL6Q8IUX8 553 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 KLHL36Q8N4N3 616 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 SPICQ8N5J4 248 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 ZNF485Q8NCK3 441 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 RAB39BQ96DA2 213 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 PDCD1LG2Q9BQ51 273 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 ERVK-18Q9QC07 812 aa13.89□□□□□ -0.19
LRRC42-201ENST00000319223 ARHGAP32A7KAX9 2087 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 IGHV3OR15-7A0A075B7D8 119 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 ANKRD61A6NGH8 418 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 TMEM210A6NLX4 147 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 F5H0A9 414 aaPredicted RBP13.88□□□□□ -0.19
LRRC42-201ENST00000319223 SLC1A7O00341 560 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 FSTL3O95633 263 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 MSMBP08118 114 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 WNT2P09544 360 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 HOXB4P17483 251 aaPredicted RBP13.88□□□□□ -0.19
LRRC42-201ENST00000319223 MYL12AP19105 171 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 VHLP40337 213 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 GNG3P63215 75 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 MUC20Q8N307 709 aaPredicted RBP13.88□□□□□ -0.19
LRRC42-201ENST00000319223 ZNF676Q8N7Q3 588 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 MYCBPQ99417 103 aaPredicted RBP13.88□□□□□ -0.19
LRRC42-201ENST00000319223 WDR13Q9H1Z4 485 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 PLEKHA1Q9HB21 404 aa13.88□□□□□ -0.19
LRRC42-201ENST00000319223 PAK1IP1Q9NWT1 392 aaPredicted RBP13.88□□□□□ -0.19
LRRC42-201ENST00000319223 PTGES3LE9PB15 166 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 LGALS8O00214 317 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 TNFRSF13BO14836 293 aaPredicted RBP13.87□□□□□ -0.19
LRRC42-201ENST00000319223 CFHR2P36980 270 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 TGM4P49221 684 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 GMFBP60983 142 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 LCN2P80188 198 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 TMPRSS11AQ6ZMR5 421 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 FAM90A1Q86YD7 464 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 STX19Q8N4C7 294 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 TRMT10AQ8TBZ6 339 aaKnown RBP13.87□□□□□ -0.19
LRRC42-201ENST00000319223 NPRL2Q8WTW4 380 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 FGGYQ96C11 551 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 HIF1ANQ9NWT6 349 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 BABAM2Q9NXR7 383 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 HHLA2Q9UM44 414 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 ZFHX3Q15911 3703 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 TRBV2A0A0J9YWF9 115 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 PQLC2LA1A4F0 135 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 OOEPA6NGQ2 149 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 OR5B21A6NL26 309 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 AKR7A2O43488 359 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 DVL1P1P54792 670 aaPredicted RBP13.87□□□□□ -0.19
LRRC42-201ENST00000319223 HAGHLQ6PII5 290 aaPredicted RBP13.87□□□□□ -0.19
LRRC42-201ENST00000319223 IL17RELQ6ZVW7 336 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 OR52N1Q8NH53 320 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 OR5AK2Q8NH90 309 aa13.87□□□□□ -0.19
LRRC42-201ENST00000319223 RGP1Q92546 391 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms