RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ZNF880Q6PDB4 577 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 PRSS54Q6PEW0 395 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 DGAT2L6Q6ZPD8 337 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 THNSL2Q86YJ6 484 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 UEVLDQ8IX04 471 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 ZNF485Q8NCK3 441 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 OR52N5Q8NH56 324 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 OR14L1PQ8NHC6 308 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 TMEM234Q8WY98 164 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 RBMXL1Q96E39 390 aaKnown RBP6.72□□□□□ -1.33
CDHR3-201ENST00000317716 BORCS8Q96FH0 119 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 ZNF681Q96N22 645 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 GPHA2Q96T91 129 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 STACQ99469 402 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 VN1R1Q9GZP7 353 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 MMP25Q9NPA2 562 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 RCC2Q9P258 522 aaKnown RBP6.72□□□□□ -1.33
CDHR3-201ENST00000317716 KLHL13Q9P2N7 655 aa6.72□□□□□ -1.33
CDHR3-201ENST00000317716 NLRC5Q86WI3 1866 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 MEX3AA1L020 520 aaKnown RBP6.71□□□□□ -1.33
CDHR3-201ENST00000317716 A6NIZ1 184 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 RAB27BO00194 218 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 LAMTOR5O43504 91 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 SEMA4FO95754 770 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 CST4P01036 141 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 SERPINA7P05543 415 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 SERPINE2P07093 398 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 OR5H8P0DN80 308 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 C5AR1P21730 350 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 RAP1BP61224 184 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 MICBQ29980 383 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 DEFB133Q30KQ1 61 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 C1orf140Q5VVS0 124 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 TCEAL6Q6IPX3 200 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 LGI3Q8N145 548 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 RTN4IP1Q8WWV3 396 aaPredicted RBP6.71□□□□□ -1.33
CDHR3-201ENST00000317716 PIGCQ92535 297 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 MRPL24Q96A35 216 aaKnown RBP6.71□□□□□ -1.33
CDHR3-201ENST00000317716 KLHDC7BQ96G42 594 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 OR10C1Q96KK4 312 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 TIMM29Q9BSF4 260 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 SLC35B3Q9H1N7 401 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 SMOC1Q9H4F8 434 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 AURKAIP1Q9NWT8 199 aaPredicted RBP6.71□□□□□ -1.33
CDHR3-201ENST00000317716 SLC5A6Q9Y289 635 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 NPTNQ9Y639 398 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 WSB1Q9Y6I7 421 aa6.71□□□□□ -1.33
CDHR3-201ENST00000317716 TRAV36DV7A0A075B6V5 113 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 H0YL77 283 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 EIF1BO60739 113 aaKnown RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ADH1BP00325 375 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 F10P00742 488 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 CEACAM5P06731 702 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 FAHP16930 419 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 PPP1CCP36873 323 aaKnown RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 EIF1P41567 113 aaKnown RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 RAB38P57729 211 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 HABP2Q14520 560 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 RSPO4Q2I0M5 234 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ARTNQ5T4W7 220 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF385CQ66K41 422 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF66Q6ZN08 573 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 PRSS35Q8N3Z0 413 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ELSPBP1Q96BH3 223 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 MALSU1Q96EH3 234 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 RRNAD1Q96FB5 475 aaKnown RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 BSCL2Q96G97 398 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 LIN37Q96GY3 246 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 SHDQ96IW2 340 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 OPA3Q9H6K4 179 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF275Q9NSD4 429 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 DOK5Q9P104 306 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 KCNK7Q9Y2U2 307 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 HSD17B6O14756 317 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 IAPPP10997 89 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ERVS71-1P61550 626 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 SLC35A1P78382 337 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 LY6G6FQ5SQ64 297 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 RAET1LQ5VY80 246 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 SLC25A42Q86VD7 318 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF709Q8N972 641 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 SLC37A2Q8TED4 501 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 RAB39BQ96DA2 213 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 LRFN5Q96NI6 719 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 GFI1Q99684 422 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 HDHD3Q9BSH5 251 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-201ENST00000317716 KIR3DX1Q9H7L2 352 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 COA4Q9NYJ1 87 aa6.71□□□□□ -1.34
CDHR3-201ENST00000317716 FREM3P0C091 2139 aa6.7□□□□□ -1.34
CDHR3-201ENST00000317716 LOC102724200A0A096LPH7 203 aaPredicted RBP6.7□□□□□ -1.34
CDHR3-201ENST00000317716 PPP5D1E7EU14 171 aa6.7□□□□□ -1.34
CDHR3-201ENST00000317716 TGOLN2O43493 480 aa6.7□□□□□ -1.34
CDHR3-201ENST00000317716 SPRY1O43609 319 aaPredicted RBP6.7□□□□□ -1.34
CDHR3-201ENST00000317716 ADAM11O75078 769 aa6.7□□□□□ -1.34
CDHR3-201ENST00000317716 TRAPPC6AO75865 159 aa6.7□□□□□ -1.34
CDHR3-201ENST00000317716 NKX2-1P43699 371 aaPredicted RBP6.7□□□□□ -1.34
CDHR3-201ENST00000317716 CSNK1EP49674 416 aaKnown RBP6.7□□□□□ -1.34
CDHR3-201ENST00000317716 H3F3AP84243 136 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms