RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CCDC187A0A096LP49 1063 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 GOSR2O14653 212 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 FARS2O95363 451 aaKnown RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ACAA1P09110 424 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 GNB3P16520 340 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 AP3S2P59780 193 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ERVK11-1P61568 191 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 SORDQ00796 357 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 IL11RAQ14626 422 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ARHGAP40Q5TG30 622 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF57Q68EA5 555 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 HAPLN4Q86UW8 402 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 HAS2Q92819 552 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ERGIC1Q969X5 290 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF416Q9BWM5 594 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 HES4Q9HCC6 221 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 MMP26Q9NRE1 261 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 COQ3Q9NZJ6 369 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 SMAD9O15198 467 aaKnown RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 IFNA16P05015 189 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 SNCAP37840 140 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 DHPSP49366 369 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 CAPZA1P52907 286 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 FAM3AP98173 230 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TGIF1Q15583 401 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 NNATQ16517 81 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 MEIOBQ8N635 442 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TERB2Q8NHR7 220 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 COL26A1Q96A83 441 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 SGK3Q96BR1 496 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 FOXRED1Q96CU9 486 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 GAL3ST1Q99999 423 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 PARP11Q9NR21 331 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 MYOTQ9UBF9 498 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 WIF1Q9Y5W5 379 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 MGAQ8IWI9 3026 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 MED12LQ86YW9 2145 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TOXO94900 526 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 IL6RP08887 468 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF28P17035 718 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM244Q5VVB8 128 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 IGFL3Q6UXB1 125 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 DEFB124Q8NES8 71 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF671Q8TAW3 534 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 APOBEC3DQ96AK3 386 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 GRHPRQ9UBQ7 328 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 A0A0G2JMM0 328 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 A0A1W2PPB8 328 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 A0A1W2PRS3 328 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 KIR3DP1A8MWS1 328 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 AGRPO00253 132 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 GPR31O00270 319 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 FBXO24O75426 580 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 MT-CO3P00414 261 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 ERCC1P07992 297 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 SPARCP09486 303 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 MAOBP27338 520 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 PRSS3P35030 304 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 OC90Q02509 493 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TLE3Q04726 772 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TCEA2Q15560 299 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 VWC2Q2TAL6 325 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF542PQ5EBM4 170 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 KIAA2026Q5HYC2 2103 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 OR8G5Q8NG78 346 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 NUDCD2Q8WVJ2 157 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 RERGQ96A58 199 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 SLC25A44Q96H78 314 aaPredicted RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 CITED4Q96RK1 184 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TAS2R10Q9NYW0 307 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 TAAR3PQ9P1P4 343 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 SHANK1Q9Y566 2161 aa6.73□□□□□ -1.33
CNOT4-201ENST00000315544 ASCC3Q8N3C0 2202 aaKnown RBP6.73□□□□□ -1.33
CNOT4-201ENST00000315544 NUDT19A8MXV4 375 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 SLC16A7O60669 478 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 RFC3P40938 356 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 OR1D5P58170 312 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 PPA1Q15181 289 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 FAM27BQ5VT28 67 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF324BQ6AW86 544 aaPredicted RBP6.72□□□□□ -1.33
CNOT4-201ENST00000315544 OR2A2Q6IF42 318 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 C20orf204Q6ZNR8 217 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 C12orf45Q8N5I9 185 aaPredicted RBP6.72□□□□□ -1.33
CNOT4-201ENST00000315544 STEAP2Q8NFT2 490 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 OR4K17Q8NGC6 315 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 DUSP19Q8WTR2 217 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM45BQ96B21 275 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM41AQ96HV5 264 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 PYGO2Q9BRQ0 406 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 SELENOIQ9C0D9 397 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 SLC2A9Q9NRM0 540 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 MED29Q9NX70 200 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 LAMP5Q9UJQ1 280 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 RBBP9O75884 186 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 IL18BPO95998 194 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 OR8U8P0C7N1 319 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 OR1D4P47884 311 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 NPBWR2P48146 333 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms