RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 TRIM61Q5EBN2 209 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 ZNF787Q6DD87 383 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 MUCL1Q96DR8 90 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 FER1L6-AS2Q96M78 137 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 KCNK15Q9H427 330 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 TAF1LQ8IZX4 1826 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 MBTPS2O43462 519 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 SPRY1O43609 319 aaPredicted RBP12.4□□□□□ -0.42
ZNF541-202ENST00000314121 DHRS3O75911 302 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 HLA-DQB1P01920 261 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 COL9A1P20849 921 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
ZNF541-202ENST00000314121 THBS3P49746 956 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
ZNF541-202ENST00000314121 C15orf54Q8N8G6 183 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 HLA-CQ95604 372 aa12.4□□□□□ -0.42
ZNF541-202ENST00000314121 RCL1Q9Y2P8 373 aaKnown RBP12.4□□□□□ -0.42
ZNF541-202ENST00000314121 ADAP1O75689 374 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 CST7O76096 145 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 HAAOP46952 286 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 KCNJ3P48549 501 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 PRSS53Q2L4Q9 553 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 BAGE2Q86Y30 109 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 GAR1Q9NY12 217 aaKnown RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 RAB13P51153 203 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 FUT5Q11128 374 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ENDOGQ14249 297 aaKnown RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 JMJD6Q6NYC1 403 aaPredicted RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ASB5Q8WWX0 329 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 PIK3IP1Q96FE7 263 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 TECTBQ96PL2 329 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ZNF230Q9UIE0 474 aaPredicted RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 GPR160Q9UJ42 338 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ZNF732B4DXR9 585 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 GPR31O00270 319 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 EML2O95834 649 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 TXNDC12O95881 172 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 POU2F2P09086 479 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 EDN3P14138 238 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 CEACAM16Q2WEN9 425 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ZNF362Q5T0B9 420 aaPredicted RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 Q6ZS52 159 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ZDHHC23Q8IYP9 409 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 OR10P1Q8NGE3 313 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 NTNG2Q96CW9 530 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 SMIM7Q9BQ49 75 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 LIN7CQ9NUP9 197 aaKnown RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 IGKV1-8A0A0C4DH67 115 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 CDC14BO60729 498 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 CLDN15P56746 228 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 GGTLC2Q14390 218 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 SLC25A42Q86VD7 318 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 DAZAP1Q96EP5 407 aaKnown RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 ALKBH3Q96Q83 286 aaPredicted RBP12.39□□□□□ -0.43
ZNF541-202ENST00000314121 LHX9Q9NQ69 397 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
ZNF541-202ENST00000314121 MPPED1O15442 326 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 CT45A8P0DMV1 189 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 CT45A9P0DMV2 189 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 NQO2P16083 231 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 ARR3P36575 388 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 TUSC1Q2TAM9 212 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 CT45A2Q5DJT8 189 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 GCNT2Q8N0V5 402 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 OR1L3Q8NH93 324 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 OR1F12Q8NHA8 337 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 ZNF391Q9UJN7 358 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 PIAS2O75928 621 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
ZNF541-202ENST00000314121 SLC37A1P57057 533 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 NANOS3P60323 173 aaKnown RBP12.38□□□□□ -0.43
ZNF541-202ENST00000314121 CATSPERDQ86XM0 798 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 A0A1W2PQD3 144 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 HRKO00198 91 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 MBP02144 154 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 PGA3P0DJD8 388 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 ARL3P36405 182 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 PLGLAQ15195 96 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 SURF2Q15527 256 aaPredicted RBP12.38□□□□□ -0.43
ZNF541-202ENST00000314121 TMEM178AQ8NBL3 297 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 RPS4Y2Q8TD47 263 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 MCHR2Q969V1 340 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 RPUSD4Q96CM3 377 aaKnown RBP12.38□□□□□ -0.43
ZNF541-202ENST00000314121 FOXB1Q99853 325 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 ADAM19Q9H013 955 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 CA10Q9NS85 328 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 DUSP13Q9UII6 198 aa12.38□□□□□ -0.43
ZNF541-202ENST00000314121 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms