RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TECTBQ96PL2 329 aa10.28□□□□□ -0.76
TRIM40-205ENST00000307859 GAL3ST1Q99999 423 aa10.28□□□□□ -0.76
TRIM40-205ENST00000307859 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
TRIM40-205ENST00000307859 NEK6Q9HC98 313 aa10.28□□□□□ -0.76
TRIM40-205ENST00000307859 NUDT15Q9NV35 164 aa10.28□□□□□ -0.76
TRIM40-205ENST00000307859 ALG5Q9Y673 324 aa10.28□□□□□ -0.76
TRIM40-205ENST00000307859 ZNF816-ZNF321PA0A0X1KG74 233 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 CHRM2P08172 466 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 CCR6P51684 374 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 ACTBP60709 375 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 ACTG1P63261 375 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 PCGF3Q3KNV8 242 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 DMRTC1Q5HYR2 192 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 VWA1Q6PCB0 445 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 BTN2A1Q7KYR7 527 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 MDP1Q86V88 176 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 DRAXINQ8NBI3 349 aaPredicted RBP10.27□□□□□ -0.77
TRIM40-205ENST00000307859 C1orf162Q8NEQ5 155 aaPredicted RBP10.27□□□□□ -0.77
TRIM40-205ENST00000307859 CPNE2Q96FN4 548 aaPredicted RBP10.27□□□□□ -0.77
TRIM40-205ENST00000307859 TMEM59Q9BXS4 323 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 CST11Q9H112 138 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 OPA3Q9H6K4 179 aa10.27□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF107Q9UII5 783 aaPredicted RBP10.27□□□□□ -0.77
TRIM40-205ENST00000307859 PRRC2CQ9Y520 2896 aaKnown RBP10.26□□□□□ -0.77
TRIM40-205ENST00000307859 A0A0A6YYD4 124 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 WDR1O75083 606 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 TNFSF13O75888 250 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 MPIG6BO95866 241 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 NRASP01111 189 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 CCL2P13500 99 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
TRIM40-205ENST00000307859 CCNOP22674 350 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 PTGER4P35408 488 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 APLNRP35414 380 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 FAUP35544 74 aaKnown RBP10.26□□□□□ -0.77
TRIM40-205ENST00000307859 PRSS12P56730 875 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 GK2Q14410 553 aaPredicted RBP10.26□□□□□ -0.77
TRIM40-205ENST00000307859 GABRA6Q16445 453 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 TBR1Q16650 682 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF324BQ6AW86 544 aaPredicted RBP10.26□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF585AQ6P3V2 769 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 LHFPL2Q6ZUX7 228 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 SEM1Q6ZVN7 128 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 C1QL2Q7Z5L3 287 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 ZGRF1Q86YA3 2104 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 GABRG1Q8N1C3 465 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 FAM89BQ8N5H3 189 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 CNEP1R1Q8N9A8 125 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 OR5D18Q8NGL1 313 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 OR10R2Q8NGX6 335 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 OR6F1Q8NGZ6 308 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 TNFAIP8L1Q8WVP5 186 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 ABHD17AQ96GS6 310 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 RNF170Q96K19 258 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 NICN1Q9BSH3 213 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 PLSCR4Q9NRQ2 329 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 KCNN3Q9UGI6 736 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 TP53TG5Q9Y2B4 290 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 COL12A1Q99715 3063 aa10.26□□□□□ -0.77
TRIM40-205ENST00000307859 TLN1Q9Y490 2541 aaKnown RBP10.26□□□□□ -0.77
TRIM40-205ENST00000307859 IGKV1-27A0A075B6S5 117 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 TRAV6A0A075B6T7 132 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 A0A1W2PP11 408 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 C7orf66A4D0T2 115 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 TMEM235A6NFC5 223 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 J3QW42 95 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 ICMTO60725 284 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF14P17017 642 aaPredicted RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 VEGFCP49767 419 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 MTCP1P56278 107 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 RPS27AP62979 156 aaKnown RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 FOXF2Q12947 444 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 MALLQ13021 153 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 SLC22A6Q4U2R8 563 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 KRTCAP3Q53RY4 240 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 RTL6Q6ICC9 239 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 ASCL4Q6XD76 172 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 Q6ZTK2 550 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 TMEM229BQ8NBD8 167 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 OR56B2PQ8NGI1 322 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 OR4C16Q8NGL9 310 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 OR56B4Q8NH76 319 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 CMBLQ96DG6 245 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 URM1Q9BTM9 101 aaKnown RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 TM2D1Q9BX74 207 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 BANF2Q9H503 90 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 ZMAT3Q9HA38 289 aaKnown RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 ELF5Q9UKW6 265 aaPredicted RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 ING4Q9UNL4 249 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 FLNCQ14315 2725 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 C2CD3Q4AC94 2353 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 MEIS3P1A6NDR6 274 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 FOXI3A8MTJ6 420 aaPredicted RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
TRIM40-205ENST00000307859 RAD51DO75771 328 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 CCNKO75909 580 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 LYZL6O75951 148 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 DHFRP00374 187 aa10.25□□□□□ -0.77
TRIM40-205ENST00000307859 NGFP01138 241 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms