RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 LRP6O75581 1613 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 OR2M5A3KFT3 312 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 BCL2L11O43521 198 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 PTBP1P26599 531 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■■■□ 26
USP38-201ENST00000307017 SUOXP51687 545 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 FOXL2P58012 376 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 NKG7Q16617 165 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 TSEN54Q7Z6J9 526 aaKnown RBP11.36□□□□□ -0.59
USP38-201ENST00000307017 CA13Q8N1Q1 262 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 ZNF383Q8NA42 475 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 C11orf40Q8WZ69 217 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 NUDT19A8MXV4 375 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 MUC20Q8N307 709 aaPredicted RBP11.36□□□□□ -0.59
USP38-201ENST00000307017 C2orf50Q96LR7 162 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 WFIKKN1Q96NZ8 548 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 E5RGE8 158 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 M0R1X1 148 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 WNT11O96014 354 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 DYNLT3P51808 116 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
USP38-201ENST00000307017 GRINAQ7Z429 371 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 SLC38A6Q8IZM9 456 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 TP53I13Q8NBR0 393 aaPredicted RBP11.36□□□□□ -0.59
USP38-201ENST00000307017 OR5A2Q8NGI9 324 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 NSG2Q9Y328 171 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 RRP8O43159 456 aaKnown RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 ZNF207O43670 478 aaKnown RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 MT-CO3P00414 261 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 IL3RAP26951 378 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 SUB1P53999 127 aaKnown RBP eCLIP11.35□□□□□ -0.59
USP38-201ENST00000307017 C11orf87Q6NUJ2 197 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 OR1J1Q8NGS3 322 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 RAB18Q9NP72 206 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 PCOLCE2Q9UKZ9 415 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 GOSR1O95249 250 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 EPXP11678 715 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 XKR7Q5GH72 579 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 CLDN23Q96B33 292 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 MENTQ9BUN1 341 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 DAPP1Q9UN19 280 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 A0A1W2PPE2 198 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 FCN1O00602 326 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 RHBDL1O75783 438 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 RAB7AP51149 207 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 DCAF7P61962 342 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 SRPXP78539 464 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 TCTN3Q6NUS6 607 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 ZNF841Q6ZN19 808 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 ZADH2Q8N4Q0 377 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 OR2I1PQ8NGU4 316 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 SPACA9Q96E40 222 aaPredicted RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 MOB1AQ9H8S9 216 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 AKIP1Q9NQ31 210 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 R4GMQ9 66 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 C5orf52A6NGY3 159 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 SHISA7A6NL88 538 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 TCF21O43680 179 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 CIDEAO60543 219 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 ZNF737O75373 536 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 HSBP1O75506 76 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 WIPI1Q5MNZ9 446 aaPredicted RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 PTCRAQ6ISU1 281 aaPredicted RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 SNX22Q96L94 193 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 PSG11Q9UQ72 335 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 AMDHD2Q9Y303 409 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 RER1O15258 196 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 OTX1P32242 354 aaPredicted RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 RHOBP62745 196 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 RAB32Q13637 225 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 SLC35D3Q5M8T2 416 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 OR10AC1Q8NH08 325 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 TMEM30AQ9NV96 361 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 CD200P41217 278 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 LYZP61626 148 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 METRNLQ641Q3 311 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 C6orf15Q6UXA7 325 aaPredicted RBP11.35□□□□□ -0.59
USP38-201ENST00000307017 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 OR5C1Q8NGR4 320 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 GDE1Q9NZC3 331 aa11.35□□□□□ -0.59
USP38-201ENST00000307017 IL5P05113 134 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 ACAA2P42765 397 aaKnown RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 SLC17A1Q14916 467 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 MRM1Q6IN84 353 aaKnown RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 LYPD8Q6UX82 237 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 ZNF561Q8N587 486 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 SMIM19Q96E16 107 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 CMC2Q9NRP2 79 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 M0R2Z0 102 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 TNFSF15O95150 251 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 MGPP08493 103 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 ZBTB25P24278 435 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms