RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 KIR2DS3K7RE56 304 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 YIF1AO95070 293 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 RPL12P30050 165 aaKnown RBP12.91□□□□□ -0.34
PTPN9-201ENST00000306726 KIR2DS5Q14953 304 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 UEVLDQ8IX04 471 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 FLVCR1-AS1Q8TAF5 88 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 GPBAR1Q8TDU6 330 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 BSCL2Q96G97 398 aaPredicted RBP12.91□□□□□ -0.34
PTPN9-201ENST00000306726 EFSO43281 561 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 RAMP1O60894 148 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 PPICP45877 212 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 UNC119Q13432 240 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 FZD2Q14332 565 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 PLXDC2Q6UX71 529 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 PGAP1Q75T13 922 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 STX12Q86Y82 276 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 MCHR2Q969V1 340 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 PIK3IP1Q96FE7 263 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 FAAP24Q9BTP7 215 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 FGF21Q9NSA1 209 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 FBXL17Q9UF56 701 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 PILRBQ9UKJ0 227 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 TECTAO75443 2155 aa12.91□□□□□ -0.34
PTPN9-201ENST00000306726 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
PTPN9-201ENST00000306726 SOX15O60248 233 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 TRAPPC6AO75865 159 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 LCATP04180 440 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 QDPRP09417 244 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 FOLR1P15328 257 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 POLR2HP52434 150 aaKnown RBP12.9□□□□□ -0.34
PTPN9-201ENST00000306726 MTCP1P56278 107 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 DMWDQ09019 674 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 IL10RAQ13651 578 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 TCEAL3Q969E4 200 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF426Q9BUY5 554 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 FBP1P09467 338 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 GNRHRP30968 328 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 GHRLQ9UBU3 117 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 KMT2EQ8IZD2 1858 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 OR5H15A6NDH6 313 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 PRR19A6NJB7 356 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 GDF9O60383 454 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 CER1O95813 267 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 FABP1P07148 127 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 GGTLC2Q14390 218 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 FAM209BQ5JX69 171 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 PHF19Q5T6S3 580 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 C9orf40Q8IXQ3 194 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 EXD3Q8N9H8 876 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 PRO1933Q9H354 126 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF581Q9P0T4 197 aa12.9□□□□□ -0.34
PTPN9-201ENST00000306726 PHYHO14832 338 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 OR7C1O76099 320 aaPredicted RBP12.89□□□□□ -0.35
PTPN9-201ENST00000306726 CNOT4O95628 575 aaKnown RBP12.89□□□□□ -0.35
PTPN9-201ENST00000306726 APOC1P02654 83 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 ZBTB25P24278 435 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 CX3CR1P49238 355 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 SLC25A1P53007 311 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 WDFY1Q8IWB7 410 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 SGPP2Q8IWX5 399 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
PTPN9-201ENST00000306726 IFT22Q9H7X7 185 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 A0A1W2PPE3 182 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 MLF1P58340 268 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 RSU1Q15404 277 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 OR4A4PQ8NGN8 299 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 UMAD1C9J7I0 102 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 BMP5P22003 454 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 TMEM33P57088 247 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 SRYQ05066 204 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 RIPPLY1Q0D2K3 151 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 ACTBL2Q562R1 376 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 KIRREL1Q96J84 757 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 SLC46A1Q96NT5 459 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 OR10A2Q9H208 303 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 PIGLQ9Y2B2 252 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 MEMO1Q9Y316 297 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 FLVCR1Q9Y5Y0 555 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 SPTAN1Q13813 2472 aaKnown RBP12.89□□□□□ -0.35
PTPN9-201ENST00000306726 PCDH15Q96QU1 1955 aa12.89□□□□□ -0.35
PTPN9-201ENST00000306726 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PLPP3O14495 311 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PHF1O43189 567 aaPredicted RBP12.88□□□□□ -0.35
PTPN9-201ENST00000306726 RFC3P40938 356 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 HSD17B7P56937 341 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PJVKQ0ZLH3 352 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 SGCBQ16585 318 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
PTPN9-201ENST00000306726 MOB3CQ70IA8 216 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 H1FNTQ75WM6 255 aaPredicted RBP12.88□□□□□ -0.35
PTPN9-201ENST00000306726 SLC22A8Q8TCC7 542 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PIGQQ9BRB3 760 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 C9JQL5 133 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 RAD51DO75771 328 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms