RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TMEM272A0A1B0GTI8 110 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 CD80P33681 288 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 SRSF5Q13243 272 aaKnown RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 CDONQ4KMG0 1287 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 WDR74Q6RFH5 385 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 LCN15Q6UWW0 184 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 TPPP3Q9BW30 176 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 ADAM19Q9H013 955 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 TMEM30CPA0ZSE6 113 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 C20orf202A1L168 122 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 FLI1Q01543 452 aaPredicted RBP14.23□□□□□ -0.13
USP42-201ENST00000306177 EXOSC2Q13868 293 aaKnown RBP14.23□□□□□ -0.13
USP42-201ENST00000306177 ACOT6Q3I5F7 207 aaPredicted RBP14.23□□□□□ -0.13
USP42-201ENST00000306177 Q7L0L9 218 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 UBE3DQ7Z6J8 389 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 ZFP62Q8NB50 900 aaPredicted RBP14.23□□□□□ -0.13
USP42-201ENST00000306177 WDR89Q96FK6 387 aaPredicted RBP14.23□□□□□ -0.13
USP42-201ENST00000306177 MOGAT1Q96PD6 335 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 A0A1W2PQD3 144 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 GALNSP34059 522 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 INSL4Q14641 139 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 GAB2Q9UQC2 676 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 TNFSF14O43557 240 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 FPR2P25090 351 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 P2RX3P56373 397 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 HAGHQ16775 308 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 VASH2Q86V25 355 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 OR52N4Q8NGI2 321 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 C14orf79Q96F83 325 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 VSTM2LQ96N03 204 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 MAGT1Q9H0U3 335 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 R4GN57 208 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 TRGV10A0A0A0MS01 117 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 NDUFB6O95139 128 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 CLEC3BP05452 202 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 ZNF32P17041 273 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 TNFRSF1AP19438 455 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 ZNF774Q6NX45 483 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 ADGRG3Q86Y34 549 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 ZNF439Q8NDP4 499 aa14.23□□□□□ -0.13
USP42-201ENST00000306177 UMAD1C9J7I0 102 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 SPINT1O43278 529 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 ICMTO60725 284 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 EML2O95834 649 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 PCMT1P22061 227 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 ZDHHC22Q8N966 263 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 OR10Z1Q8NGY1 313 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 LHX4Q969G2 390 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 SMOC1Q9H4F8 434 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 LHX9Q9NQ69 397 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 CLEC1BQ9P126 229 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 PCOLCE2Q9UKZ9 415 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 TRBV5-3A0A0A0MS03 114 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 CBR1P16152 277 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 HIST1H1DP16402 221 aaKnown RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 CTLA4P16410 223 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 PSG6Q00889 435 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 ZNF680Q8NEM1 530 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 DEFB124Q8NES8 71 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 URGCP-MRPS24S4R325 110 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 COL11A1P12107 1806 aaPredicted RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 A0A1W2PPV9 198 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 BCL2L11O43521 198 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 TRAF3IP2O43734 574 aaPredicted RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 COX5AP20674 150 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 PTGFRP43088 359 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 ALKBH6Q3KRA9 238 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 RPUSD3Q6P087 351 aaKnown RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 SLC16A12Q6ZSM3 486 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 TSEN54Q7Z6J9 526 aaKnown RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 D2HGDHQ8N465 521 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 M1APQ8TC57 530 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 SARGQ9BW04 601 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 A0A1W2PQF6 199 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 NDUFA6P56556 154 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 FAM122CQ6P4D5 195 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 KDF1Q8NAX2 398 aaPredicted RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 RELL2Q8NC24 303 aaPredicted RBP14.22□□□□□ -0.13
USP42-201ENST00000306177 QPCTLQ9NXS2 382 aa14.22□□□□□ -0.13
USP42-201ENST00000306177 SPRY3O43610 288 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 HYAL3O43820 417 aaPredicted RBP14.21□□□□□ -0.13
USP42-201ENST00000306177 ADRB1P08588 477 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 RPL11P62913 178 aaKnown RBP14.21□□□□□ -0.13
USP42-201ENST00000306177 MESP2Q0VG99 397 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 PABPC1L2AQ5JQF8 200 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 C8orf82Q6P1X6 216 aaPredicted RBP14.21□□□□□ -0.13
USP42-201ENST00000306177 C17orf47Q8NEP4 570 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 ARHGAP5-AS1Q96IT6 56 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 SOX7Q9BT81 388 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 FSCN3Q9NQT6 498 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 ZNF275Q9NSD4 429 aaPredicted RBP14.21□□□□□ -0.13
USP42-201ENST00000306177 PPP1R2P9O14990 202 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 GPR37O15354 613 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 AKR7A2O43488 359 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 TMEM11P17152 192 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 CSN1S1P47710 185 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 UBE2G2P60604 165 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 TMEM123Q8N131 208 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 MED30Q96HR3 178 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 MTFP1Q9UDX5 166 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms