RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FFAR4Q5NUL3 377 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 DEGS2Q6QHC5 323 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SLC16A12Q6ZSM3 486 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ADGRG7Q96K78 797 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 FAM210BQ96KR6 192 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ATP5SQ99766 215 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 B9D1Q9UPM9 204 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 GPR3P46089 330 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 Q6ZNB5 142 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 KLHDC9Q8NEP7 349 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SLC37A2Q8TED4 501 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 PTPRFP10586 1907 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 WDR1O75083 606 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 CTAG2O75638 210 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 HRASP01112 189 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 APEHP13798 732 aaKnown RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF750Q32MQ0 723 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 JMJD6Q6NYC1 403 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 FAAP20Q6NZ36 180 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 BTNL3Q6UXE8 466 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 MRPS24Q96EL2 167 aaKnown RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 OR8B4Q96RC9 309 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ANGPTL4Q9BY76 406 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 NXF2Q9GZY0 626 aaKnown RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 LRP12Q9Y561 859 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ADAMTSL1Q8N6G6 1762 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 TRGV10A0A0A0MS01 117 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 HSBP1O75506 76 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SLC25A4P12235 298 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 NQO2P16083 231 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 FCER1GP30273 86 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 CD200P41217 278 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 EMDP50402 254 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 RHOBP62745 196 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 CCSMST1Q4G0I0 132 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 GPR137Q96N19 417 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 DERL3Q96Q80 235 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 NAA60Q9H7X0 242 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 UQCC1Q9NVA1 299 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 A4GNTQ9UNA3 340 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 C17orf78Q8N4C9 275 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SLC26A10Q8NG04 563 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 OR52B4Q8NGK2 314 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 FGF14Q92915 247 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 GSX1Q9H4S2 264 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SFT2D2O95562 160 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 MPC2O95563 127 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 IRS1P35568 1242 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 GPM6AP51674 278 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SPCS3P61009 180 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 PPP1CAP62136 330 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 PLAC9Q5JTB6 97 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 VHLLQ6RSH7 139 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SCCPDHQ8NBX0 429 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 OR1F12Q8NHA8 337 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 NPAS1Q99742 590 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 BET1LQ9NYM9 111 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 C9orf170A2RU37 121 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 LILRA5A6NI73 299 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 GPR37O15354 613 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 B4GALT3O60512 393 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 DHRS3O75911 302 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 OR5G3P0C626 314 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 HIST1H1DP16402 221 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ST3GAL2Q16842 350 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PRSS54Q6PEW0 395 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF66Q6ZN08 573 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 Q9N2K0 584 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 IAPPP10997 89 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 GLULP15104 373 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 GNB1P62873 340 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 DEFB103AP81534 67 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 EIF4E3Q8N5X7 224 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 SIGLEC11Q96RL6 698 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 CDCP1Q9H5V8 836 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PLSCR3Q9NRY6 295 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 A6NDN8 102 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 GCSHP23434 173 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ZBTB25P24278 435 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 SMAD2Q15796 467 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 Q1RN00 199 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 MS4A10Q96PG2 267 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 KLK11Q9UBX7 282 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ICE1Q9Y2F5 2266 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ANKRD34CP0C6C1 535 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 DSCR4P56555 118 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PKIAP61925 76 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 OR2A2Q6IF42 318 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 RPS19BP1Q86WX3 136 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 OR2T6Q8NHC8 308 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM56Q96MV1 263 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 SDCBPO00560 298 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 HNF1AP20823 631 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 HAAOP46952 286 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms