RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CABLES2Q9BTV7 478 aa12.78□□□□□ -0.36
CDT1-201ENST00000301019 PELI2Q9HAT8 420 aa12.78□□□□□ -0.36
CDT1-201ENST00000301019 TUBG2Q9NRH3 451 aa12.78□□□□□ -0.36
CDT1-201ENST00000301019 GNG13Q9P2W3 67 aa12.78□□□□□ -0.36
CDT1-201ENST00000301019 SLC7A11Q9UPY5 501 aa12.78□□□□□ -0.36
CDT1-201ENST00000301019 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 GALR2O43603 387 aaPredicted RBP12.77□□□□□ -0.36
CDT1-201ENST00000301019 CST7O76096 145 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 THBS4P35443 961 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 SLC6A9P48067 706 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.36
CDT1-201ENST00000301019 RPL18Q07020 188 aaKnown RBP12.77□□□□□ -0.36
CDT1-201ENST00000301019 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 COL13A1Q5TAT6 717 aaPredicted RBP12.77□□□□□ -0.36
CDT1-201ENST00000301019 MYPOPQ86VE0 399 aaPredicted RBP12.77□□□□□ -0.36
CDT1-201ENST00000301019 POC1AQ8NBT0 407 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.36
CDT1-201ENST00000301019 Q9N2J8 555 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 LAMP3Q9UQV4 416 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 WSB1Q9Y6I7 421 aa12.77□□□□□ -0.36
CDT1-201ENST00000301019 RAD51DO75771 328 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 WISP1O95388 367 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 JOSD1Q15040 202 aaPredicted RBP12.77□□□□□ -0.37
CDT1-201ENST00000301019 CALHM1Q8IU99 346 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 ZNF595Q8IYB9 648 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 ZDHHC22Q8N966 263 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 IL22RA2Q969J5 263 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 RTBDNQ9BSG5 229 aaPredicted RBP12.77□□□□□ -0.37
CDT1-201ENST00000301019 GPR173Q9NS66 373 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 DNAJB12Q9NXW2 375 aaKnown RBP12.77□□□□□ -0.37
CDT1-201ENST00000301019 CBY3A6NI87 242 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 SOD2P04179 222 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 DANCRP0C864 163 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 PET100P0DJ07 73 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 VSIG8P0DPA2 414 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 BCKDHBP21953 392 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 OR3A1P47881 315 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 PCK2Q16822 640 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 ANKRD39Q53RE8 183 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
CDT1-201ENST00000301019 CDC20BQ86Y33 519 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 C1QL4Q86Z23 238 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 OR52E1Q8NGJ3 308 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 ZNF524Q96C55 264 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 GPER1Q99527 375 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 LMF2Q9BU23 707 aaKnown RBP12.77□□□□□ -0.37
CDT1-201ENST00000301019 SLC46A2Q9BY10 475 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 AURKAIP1Q9NWT8 199 aaPredicted RBP12.77□□□□□ -0.37
CDT1-201ENST00000301019 GDE1Q9NZC3 331 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 AK3Q9UIJ7 227 aa12.77□□□□□ -0.37
CDT1-201ENST00000301019 F5P12259 2224 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 TRAV34A0A0B4J273 112 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 HMGB3O15347 200 aaKnown RBP12.76□□□□□ -0.37
CDT1-201ENST00000301019 CEACAM1P13688 526 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 HLA-GP17693 338 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 POLR2HP52434 150 aaKnown RBP12.76□□□□□ -0.37
CDT1-201ENST00000301019 SLC25A1P53007 311 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 HNRNPKP61978 463 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDT1-201ENST00000301019 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
CDT1-201ENST00000301019 RAB1AP62820 205 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 GTF3C1Q12789 2109 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 TMEM176BQ3YBM2 270 aaPredicted RBP12.76□□□□□ -0.37
CDT1-201ENST00000301019 HOGA1Q86XE5 327 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 C7orf61Q8IZ16 206 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 OR13G1Q8NGZ3 307 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 OR4X1Q8NH49 305 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 M1APQ8TC57 530 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 HIST1H2AAQ96QV6 131 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 ADOQ96SZ5 270 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 HDHD3Q9BSH5 251 aaPredicted RBP12.76□□□□□ -0.37
CDT1-201ENST00000301019 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 PAM16Q9Y3D7 125 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 PRSS12P56730 875 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 MPV17LQ2QL34 196 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 SERINC2Q96SA4 455 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 SUSD2Q9UGT4 822 aa12.76□□□□□ -0.37
CDT1-201ENST00000301019 HSD17B6O14756 317 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 CRTAPO75718 401 aaPredicted RBP12.75□□□□□ -0.37
CDT1-201ENST00000301019 S1PR1P21453 382 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 SLC17A1Q14916 467 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 RTP5Q14D33 572 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 PRR22Q8IZ63 422 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
CDT1-201ENST00000301019 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 LRP12Q9Y561 859 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 HEBP2Q9Y5Z4 205 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 A0A1W2PPQ1 181 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 CCL16O15467 120 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 CTHP32929 405 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 PTGER4P35408 488 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 PPM1AP35813 382 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms