RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 OR51B6Q9H340 312 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 TAS2R8Q9NYW2 309 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 KLK11Q9UBX7 282 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 ZNF850A8MQ14 1090 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 TMEM225BP0DP42 221 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 SSBP1Q04837 148 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 SNTB2Q13425 540 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 ZNF474Q6S9Z5 364 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 MYPOPQ86VE0 399 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 CADM3Q8N126 398 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 FAM169BQ8N8A8 192 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 SCPEP1Q9HB40 452 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 ELL3Q9HB65 397 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 TINAGQ9UJW2 476 aa13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 INTS1Q8N201 2190 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-201ENST00000300302 CACNA1AO00555 2505 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 MEIOCA2RUB1 952 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 ANKRD30BLA7E2S9 258 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 CD300LBA8K4G0 201 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 H7C417 338 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 RAB27BO00194 218 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 SMPD2O60906 423 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 AGFG2O95081 481 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 SLC6A1P30531 599 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 VEGFCP49767 419 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 ZP1P60852 638 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 PRDX4Q13162 271 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 MOGAT2Q3SYC2 334 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 ZDHHC23Q8IYP9 409 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 TMEM104Q8NE00 496 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 STEAP2Q8NFT2 490 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 OR10R2Q8NGX6 335 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 DEDD2Q8WXF8 326 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 WBP1Q96G27 269 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 NEURL2Q9BR09 285 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 C1QTNF6Q9BXI9 259 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 METTL9Q9H1A3 318 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 LPAR5Q9H1C0 372 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 POFUT1Q9H488 388 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 NLKQ9UBE8 527 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 MTFP1Q9UDX5 166 aa13.54□□□□□ -0.24
HERPUD1-201ENST00000300302 ANKRD20A5PA0PJZ0 165 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 ZNF780AO75290 641 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 LPLP06858 475 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 PSMB1P20618 241 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 BMP5P22003 454 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 UCP2P55851 309 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 ACTBP60709 375 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 PPP1CBP62140 327 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 ACTG1P63261 375 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 CEACAM21Q3KPI0 293 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 C1QTNF12Q5T7M4 302 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 C1QL2Q7Z5L3 287 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 CELF2-AS1Q8N7Q2 184 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 CHST4Q8NCG5 386 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 OR56B1Q8NGI3 324 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 HIST1H2AAQ96QV6 131 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 MMP28Q9H239 520 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 BANF2Q9H503 90 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 GPR160Q9UJ42 338 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 A0A0G2JNJ9 132 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 NAP1L6A6NFF2 107 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 IGLV1-44P01699 117 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 CSF1P09603 554 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 FAM157BP0CG42 384 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 SFTPCP11686 197 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 MGMTP16455 207 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 SERPINA2P20848 420 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 TUBG1P23258 451 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 RSU1Q15404 277 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 MRGPRGQ86SM5 289 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 GPX8Q8TED1 209 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 DPAGT1Q9H3H5 408 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 TUBG2Q9NRH3 451 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 PCDHB16Q9NRJ7 776 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 COPZ2Q9P299 210 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 Q9UFV3 132 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 MPC1Q9Y5U8 109 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
HERPUD1-201ENST00000300302 IGKV1-27A0A075B6S5 117 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 A8MXE2 369 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 EEF1E1-BLOC1S5C9J1V9 151 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 CECR9P0C854 216 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 FAUP35544 74 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 RAD52P43351 418 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 PCGF3Q3KNV8 242 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF260Q3ZCT1 412 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 CDNFQ49AH0 187 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 SPATA46Q5T0L3 261 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 Q6ZTK2 550 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 OR51T1Q8NGJ9 327 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 AQP3Q92482 292 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 S100PBPQ96BU1 408 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 MUCL1Q96DR8 90 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms