RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
CTDP1-202ENST00000299543 FOXRED1Q96CU9 486 aaPredicted RBP11.89□□□□□ -0.51
CTDP1-202ENST00000299543 LIPT2A6NK58 231 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 GDF9O60383 454 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 SRFP11831 508 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ANOS1P23352 680 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 SERPINF1P36955 418 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 MMP16P51512 607 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 PRSS12P56730 875 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 CLDN6P56747 220 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 SSBP1Q04837 148 aaKnown RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 TOMM20Q15388 145 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 RSU1Q15404 277 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 C17orf82Q86X59 251 aaPredicted RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 LRRC18Q8N456 261 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ZNF441Q8N8Z8 693 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ST8SIA1Q92185 356 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 NRIP2Q9BQI9 281 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 RHOFQ9HBH0 211 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 FAM206AQ9NX38 181 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 MED19A0JLT2 244 aaPredicted RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 GUCA1AP43080 201 aaPredicted RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 GAMTQ14353 236 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 SURF2Q15527 256 aaPredicted RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ZNF585AQ6P3V2 769 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 OR4K17Q8NGC6 315 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 RGCCQ9H4X1 137 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 MMP24Q9Y5R2 645 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 A0A087X0M5 115 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 IGHV3-15A0A0B4J1V0 119 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 A0A1B0GX30 115 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ZNF208O43345 1280 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 BCL2L11O43521 198 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 SRSF10O75494 262 aaKnown RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 QDPRP09417 244 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 HGFACQ04756 655 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 OIT3Q8WWZ8 545 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 LIN37Q96GY3 246 aaPredicted RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 CARHSP1Q9Y2V2 147 aaKnown RBP11.88□□□□□ -0.51
CTDP1-202ENST00000299543 MTCH2Q9Y6C9 303 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 WDFY4Q6ZS81 3184 aa11.88□□□□□ -0.51
CTDP1-202ENST00000299543 LDLRAD4O15165 306 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 ADAP1O75689 374 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 SLC34A2O95436 690 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 IGHG1P01857 330 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 ACKR3P25106 362 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 OR3A2P47893 321 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 HTR5AP47898 357 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 GABREP78334 506 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 GFI1BQ5VTD9 330 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 BHLHE23Q8NDY6 225 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 AQP3Q92482 292 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 THOC3Q96J01 351 aaKnown RBP11.87□□□□□ -0.51
CTDP1-202ENST00000299543 DEFB126Q9BYW3 111 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 PRDM13Q9H4Q3 707 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 METTL8Q9H825 291 aaKnown RBP11.87□□□□□ -0.51
CTDP1-202ENST00000299543 CSAG2Q9Y5P2 127 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 FREM2Q5SZK8 3169 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 KNG1P01042 644 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 IGHV2-5P01817 119 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 ISG15P05161 165 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 ZBTB25P24278 435 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 SLC25A42Q86VD7 318 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 PLPP5Q8NEB5 264 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 OR8B12Q8NGG6 310 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 SECTM1Q8WVN6 248 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
CTDP1-202ENST00000299543 B3GALT5Q9Y2C3 310 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 LHFPL6Q9Y693 200 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 CACNA1EQ15878 2313 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 MED6O75586 246 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 CD74P04233 296 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 CASRP41180 1078 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 DHPSP49366 369 aaPredicted RBP11.87□□□□□ -0.51
CTDP1-202ENST00000299543 CLDN17P56750 224 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 ACOT7LQ6ZUV0 252 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 KCNRGQ8N5I3 272 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 ARHGAP5-AS1Q96IT6 56 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 EDEM2Q9BV94 578 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 TMEM59Q9BXS4 323 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 TMPRSS5Q9H3S3 457 aa11.87□□□□□ -0.51
CTDP1-202ENST00000299543 METTL1Q9UBP6 276 aaKnown RBP11.87□□□□□ -0.51
CTDP1-202ENST00000299543 KNTC1P50748 2209 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 ARGFXA6NJG6 315 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 PHOX2AO14813 284 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 SNAPC5O75971 98 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 IFNA2P01563 188 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 AMY2BP19961 511 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 CX3CR1P49238 355 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 AFF3P51826 1226 aaKnown RBP11.86□□□□□ -0.51
CTDP1-202ENST00000299543 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 GUSBP11Q6P575 273 aa11.86□□□□□ -0.51
CTDP1-202ENST00000299543 OR51T1Q8NGJ9 327 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms