RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CD82P27701 267 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SELENOPP49908 381 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 KCNAB1Q14722 419 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 HSPB2Q16082 182 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SCGB1D4Q6XE38 83 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 TGIF2LXQ8IUE1 241 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SPNS2Q8IVW8 549 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 ZDHHC22Q8N966 263 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SLC25A43Q8WUT9 341 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-201ENST00000299333 DAPP1Q9UN19 280 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 DUXBA0A1W2PPF3 345 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 OR52L2PQ8NGH6 319 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 ZC3HAV1LQ96H79 300 aaKnown RBP13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SPAG8Q99932 426 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SELEP16581 610 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 CRYBB2P43320 205 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 OR5D13Q8NGL4 314 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 NUBPLQ8TB37 319 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 Q9N2K0 584 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 TCRBV5S1A1TA0A578 114 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 GEMIN2O14893 280 aaKnown RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 ADAM20O43506 726 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 CRYBA1P05813 215 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 HINT1P49773 126 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 CD81P60033 236 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 ZNF385CQ66K41 422 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 LSRQ86X29 649 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 MYO18AQ92614 2054 aaKnown RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 C9orf170A2RU37 121 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FAM24AA6NFZ4 105 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FXYD1O00168 92 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 TMIGD3P0DMS9 266 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 ZNF121P58317 390 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 BPIFA4PQ86YQ2 179 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FGF13Q92913 245 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 KCND3Q9UK17 655 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 NRXN3Q9Y4C0 1643 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 SERPINE3A8MV23 424 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 KRASP01116 189 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OPN1MWP04001 364 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OPN1MW2P0DN77 364 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OPN1MW3P0DN78 364 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 C11orf40Q8WZ69 217 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OR2J1Q9GZK6 312 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 VN1R1Q9GZP7 353 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 TMEM191AQ9H0A3 160 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OPN3Q9H1Y3 402 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 SLC25A22Q9H936 323 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 A0A096LPE4 126 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 A0A1W2PPZ6 126 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 SFT2D2O95562 160 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 CSN3P07498 182 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 CEBPDP49716 269 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 KHDC1LQ5JSQ8 128 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OR2T6Q8NHC8 308 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FBXL17Q9UF56 701 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FGF17O60258 216 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 EMDP50402 254 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 MVDP53602 400 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 FOXO1Q12778 655 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 SHBQ15464 509 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 YRDCQ86U90 279 aaKnown RBP13.37□□□□□ -0.27
SCN3B-201ENST00000299333 OR2M3Q8NG83 312 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 TMPRSS13Q9BYE2 586 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 GDE1Q9NZC3 331 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
SCN3B-201ENST00000299333 RGPD8O14715 1765 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-201ENST00000299333 RBFOX3A6NFN3 312 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 DNPH1O43598 174 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 HPP00738 406 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 SLC38A11Q08AI6 406 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 VN1R17PQ8TDU5 208 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 MARVELD1Q9BSK0 173 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 IL20Q9NYY1 176 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 TMEFF2Q9UIK5 374 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-201ENST00000299333 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 MYH9P35579 1960 aaKnown RBP13.36□□□□□ -0.27
SCN3B-201ENST00000299333 MBLAC1A4D2B0 266 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-201ENST00000299333 PRKNO60260 465 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-201ENST00000299333 SLC25A5P05141 298 aaKnown RBP13.36□□□□□ -0.27
SCN3B-201ENST00000299333 ELFN2Q5R3F8 820 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 OR2T10Q8NGZ9 312 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 AP5S1Q9NUS5 200 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 LRRC3CA6NJW4 275 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 HAND1O96004 215 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 YPEL5P62699 121 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 ZXDAP98168 799 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 OR1L4Q8NGR5 311 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 ROBO4Q8WZ75 1007 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 LIPGQ9Y5X9 500 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 PPM1DO15297 605 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 CRXO43186 299 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms