RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 OR8G5Q8NG78 346 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 OR5A2Q8NGI9 324 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 SLC25A38Q96DW6 304 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 BORCS8Q96FH0 119 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 C1orf147Q96MC9 270 aaPredicted RBP21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 ESRP2Q9H6T0 727 aaKnown RBP21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 FAM230AA0A1W2PPH8 454 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 PQLC2LA1A4F0 135 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 CA6P23280 308 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 PTGFRP43088 359 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 CAPZA1P52907 286 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 PLA2G7Q13093 441 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 GPER1Q99527 375 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 ABCG5Q9H222 651 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 ADAM30Q9UKF2 790 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 FZR1Q9UM11 496 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 V9GYH0 126 aa21.05■□□□□ 0.96
GTF2A1-201ENST00000298173 IGLV3-9A0A075B6K5 115 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 A0A1B0GWJ7 208 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 BPNT1O95861 308 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 IGHV3-13P01766 116 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 RPS23P62266 143 aaKnown RBP21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 ZNF846Q147U1 533 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 UBE2NLQ5JXB2 153 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 SPANXN2Q5MJ10 180 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 CNIH2Q6PI25 160 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 SYNPRQ8TBG9 265 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 RFT1Q96AA3 541 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 WDR12Q9GZL7 423 aaKnown RBP21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 FBLN5Q9UBX5 448 aa21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 MRPS28Q9Y2Q9 187 aaKnown RBP21.04■□□□□ 0.96
GTF2A1-201ENST00000298173 TMEM272A0A1B0GTI8 110 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 RANBP1P43487 201 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 ATP1B3P54709 279 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 SLC22A25Q6T423 547 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 C1QL2Q7Z5L3 287 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 LRP11Q86VZ4 500 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 CMTM4Q8IZR5 234 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 PNLDC1Q8NA58 520 aaKnown RBP21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 PTX4Q96A99 478 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 PLPPR2Q96GM1 343 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 KCNK15Q9H427 330 aa21.03■□□□□ 0.96
GTF2A1-201ENST00000298173 AWAT2Q6E213 333 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 METAP1DQ6UB28 335 aaPredicted RBP21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 GLIPR1L1Q6UWM5 242 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 ASCL4Q6XD76 172 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 DMRTC2Q8IXT2 367 aaPredicted RBP21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 DVL3Q92997 716 aaPredicted RBP21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 CPNE2Q96FN4 548 aaPredicted RBP21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 HIST1H2AAQ96QV6 131 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 CA10Q9NS85 328 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 GHRLQ9UBU3 117 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 ZNF462Q96JM2 2506 aa21.02■□□□□ 0.96
GTF2A1-201ENST00000298173 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 SHISA9B4DS77 424 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 SIAH2O43255 324 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 VSIG8P0DPA2 414 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 EFNB2P52799 333 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 ART1P52961 327 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 FAM76BQ5HYJ3 339 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 Q6ZR03 302 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 OR5D18Q8NGL1 313 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 ZNF442Q9H7R0 627 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 TMEM100Q9NV29 134 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 RHBDL2Q9NX52 303 aa21.02■□□□□ 0.95
GTF2A1-201ENST00000298173 ANKHD1Q8IWZ3 2542 aaKnown RBP21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 FABP12A6NFH5 140 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 TMEM14DPA8MWL7 114 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 FAM25AB3EWG3 89 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 FAM25CB3EWG5 89 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 FAM25GB3EWG6 89 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 TIMM8AO60220 97 aaPredicted RBP21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 PEX19P40855 299 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 PPP5CP53041 499 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 BIVMQ86UB2 503 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 TNFAIP8L1Q8WVP5 186 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 RAB40AQ8WXH6 277 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 RNF170Q96K19 258 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 SLC22A4Q9H015 551 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 EXTL2Q9UBQ6 330 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 DUSP13Q9UII6 198 aa21.01■□□□□ 0.95
GTF2A1-201ENST00000298173 WIPF3A6NGB9 483 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 OR5B21A6NL26 309 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 ZNF732B4DXR9 585 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 UBBP0CG47 229 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 CD40LGP29965 261 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 GPM6AP51674 278 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 PDZK1IP1Q13113 114 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 UNC119Q13432 240 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 ZNF79Q15937 498 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 BEX5Q5H9J7 111 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 OR10K2Q6IF99 312 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 VHLLQ6RSH7 139 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 CALHM1Q8IU99 346 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 OR4M1Q8NGD0 313 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 ZFAND2BQ8WV99 257 aa21■□□□□ 0.95
GTF2A1-201ENST00000298173 MRPL24Q96A35 216 aaKnown RBP21■□□□□ 0.95
GTF2A1-201ENST00000298173 MYEF2Q9P2K5 600 aaKnown RBP21■□□□□ 0.95
GTF2A1-201ENST00000298173 J3QRK9 145 aa20.99■□□□□ 0.95
GTF2A1-201ENST00000298173 MLNRO43193 412 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms