RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SOCS1O15524 211 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
SOX17-201ENST00000297316 OR2W3Q7Z3T1 314 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 CNEP1R1Q8N9A8 125 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 TMEM229BQ8NBD8 167 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 OR10R2Q8NGX6 335 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 PP6455Q8WZ26 134 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 GINS4Q9BRT9 223 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 MTRF1O75570 445 aaKnown RBP18.51■□□□□ 0.55
SOX17-201ENST00000297316 SULT1A3P0DMM9 295 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 SULT1A4P0DMN0 295 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 VSIG10L2P0DP72 767 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 FOXF2Q12947 444 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 SEMA6DQ8NFY4 1073 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 PRR14LQ5THK1 2151 aa18.51■□□□□ 0.55
SOX17-201ENST00000297316 SSNA1O43805 119 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 TSC22D2O75157 780 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 EDN3P14138 238 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 MPGP29372 298 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 PTGFRP43088 359 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 TAS2R19P59542 299 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 RAB1AP62820 205 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 RBMS2Q15434 407 aaKnown RBP18.5■□□□□ 0.55
SOX17-201ENST00000297316 STK11Q15831 433 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 ACSF3Q4G176 576 aaPredicted RBP18.5■□□□□ 0.55
SOX17-201ENST00000297316 PLAC9Q5JTB6 97 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 VWA1Q6PCB0 445 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 TFAP2EQ6VUC0 442 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 GLDNQ6ZMI3 551 aaPredicted RBP18.5■□□□□ 0.55
SOX17-201ENST00000297316 TRAPPC6BQ86SZ2 158 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 OR1K1Q8NGR3 316 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 OR10K1Q8NGX5 313 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 GP6Q9HCN6 339 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 DKK4Q9UBT3 224 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 KCNK7Q9Y2U2 307 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 SSX5O60225 188 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 CRTAPO75718 401 aaPredicted RBP18.5■□□□□ 0.55
SOX17-201ENST00000297316 MELTFP08582 738 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 TMEM50BP56557 158 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 GUSBP1Q15486 140 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 FAM214BQ7L5A3 538 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 OR52B4Q8NGK2 314 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 TMEM59Q9BXS4 323 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 ZNF71Q9NQZ8 489 aaPredicted RBP18.5■□□□□ 0.55
SOX17-201ENST00000297316 ING4Q9UNL4 249 aa18.5■□□□□ 0.55
SOX17-201ENST00000297316 RP1L1Q8IWN7 2480 aaPredicted RBP18.5■□□□□ 0.55
SOX17-201ENST00000297316 A0A1W2PR80 420 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 RAB3DO95716 219 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 ZNF735P0CB33 412 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 MECP2P51608 486 aaKnown RBP18.49■□□□□ 0.55
SOX17-201ENST00000297316 ZNF92Q03936 586 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 TSC22D1Q15714 1073 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 SEZ6L2Q6UXD5 910 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 ZNF584Q8IVC4 421 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 KCNG3Q8TAE7 436 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 C5orf49A4QMS7 147 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 K7ENP7 123 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 PRAF2O60831 178 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 NAT2P11245 290 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 KIR2DL2P43627 348 aaPredicted RBP18.49■□□□□ 0.55
SOX17-201ENST00000297316 TBR1Q16650 682 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 OR52W1Q6IF63 320 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 INO80CQ6PI98 192 aaPredicted RBP18.49■□□□□ 0.55
SOX17-201ENST00000297316 TNFAIP8L1Q8WVP5 186 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 BCL2L2Q92843 193 aaPredicted RBP18.49■□□□□ 0.55
SOX17-201ENST00000297316 C10orf35Q96D05 121 aa18.49■□□□□ 0.55
SOX17-201ENST00000297316 CYB5AP00167 134 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 METTL11BQ5VVY1 283 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 SLC36A1Q7Z2H8 476 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 ZNF431Q8TF32 576 aaPredicted RBP18.48■□□□□ 0.55
SOX17-201ENST00000297316 MGAT4AQ9UM21 535 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 hCG_38984A0A1B0GV85 526 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 RAD51DO75771 328 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 LYZL6O75951 148 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 CD74P04233 296 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 IGHV1-2P23083 117 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 SEM1Q6ZVN7 128 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 RPRMLQ8N4K4 120 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 CHST6Q9GZX3 395 aa18.48■□□□□ 0.55
SOX17-201ENST00000297316 NPDC1Q9NQX5 325 aaPredicted RBP18.48■□□□□ 0.55
SOX17-201ENST00000297316 IGKV1-27A0A075B6S5 117 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 MEIKINA0A087WXM9 373 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 ZNF736B4DX44 427 aaPredicted RBP18.47■□□□□ 0.55
SOX17-201ENST00000297316 OR3A3P47888 321 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 P2RX3P56373 397 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 FAM3AP98173 230 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 RIPPLY1Q0D2K3 151 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 PNLDC1Q8NA58 520 aaKnown RBP18.47■□□□□ 0.55
SOX17-201ENST00000297316 CCDC54Q8NEL0 328 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 GLRX2Q9NS18 164 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 ZZEF1O43149 2961 aa18.47■□□□□ 0.55
SOX17-201ENST00000297316 AMY2AP04746 511 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 CSN2P05814 226 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 ANXA3P12429 323 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 ALDH3B1P43353 468 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 GSK3AP49840 483 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 C3P1Q6ZMU1 363 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 CDH24Q86UP0 819 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 OR8H1Q8NGG4 311 aa18.46■□□□□ 0.55
SOX17-201ENST00000297316 WNT2BQ93097 391 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms