RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CTRB2Q6GPI1 263 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 RBMS3Q6XE24 437 aaKnown RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 HGDQ93099 445 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 DNAJB12Q9NXW2 375 aaKnown RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 LRP12Q9Y561 859 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 HRKO00198 91 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CRYBA1P05813 215 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CHRM2P08172 466 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 FKBP2P26885 142 aaKnown RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 ZNF74Q16587 644 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CD200R1LQ6Q8B3 271 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 ZFP62Q8NB50 900 aaPredicted RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 OTOSQ8NHW6 89 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 MRPS18AQ9NVS2 196 aaKnown RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 GAB2Q9UQC2 676 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 ZFHX2Q9C0A1 2572 aaPredicted RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 OGG1O15527 345 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 SPP1P10451 314 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CPN1P15169 458 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 TLE1Q04724 770 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CISD2Q8N5K1 135 aaKnown RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 TERB2Q8NHR7 220 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CPNE4Q96A23 557 aaPredicted RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 ALKBH3Q96Q83 286 aaPredicted RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 OR8B4Q96RC9 309 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 FAM173AQ9BQD7 235 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 MMP25Q9NPA2 562 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 ARID2Q68CP9 1835 aa12□□□□□ -0.49
HPS3-201ENST00000296051 SPINT1O43278 529 aa12□□□□□ -0.49
HPS3-201ENST00000296051 SCAF4O95104 1147 aaKnown RBP12□□□□□ -0.49
HPS3-201ENST00000296051 SHEQ5VZ18 495 aa12□□□□□ -0.49
HPS3-201ENST00000296051 OR10G3Q8NGC4 313 aa12□□□□□ -0.49
HPS3-201ENST00000296051 FGF11Q92914 225 aa12□□□□□ -0.49
HPS3-201ENST00000296051 METTL9Q9H1A3 318 aa12□□□□□ -0.49
HPS3-201ENST00000296051 TET1Q8NFU7 2136 aa12□□□□□ -0.49
HPS3-201ENST00000296051 ZNF205O95201 554 aa12□□□□□ -0.49
HPS3-201ENST00000296051 GLRA1P23415 457 aa12□□□□□ -0.49
HPS3-201ENST00000296051 PRSS12P56730 875 aa12□□□□□ -0.49
HPS3-201ENST00000296051 EGR3Q06889 387 aa12□□□□□ -0.49
HPS3-201ENST00000296051 PJVKQ0ZLH3 352 aa12□□□□□ -0.49
HPS3-201ENST00000296051 ATPAF1Q5TC12 328 aaPredicted RBP12□□□□□ -0.49
HPS3-201ENST00000296051 TAAR8Q969N4 342 aa12□□□□□ -0.49
HPS3-201ENST00000296051 FAM234AQ9H0X4 552 aa12□□□□□ -0.49
HPS3-201ENST00000296051 JTBO76095 146 aa12□□□□□ -0.49
HPS3-201ENST00000296051 FTH1P19P0C7X4 201 aa12□□□□□ -0.49
HPS3-201ENST00000296051 GNB2P62879 340 aa12□□□□□ -0.49
HPS3-201ENST00000296051 PDCD1Q15116 288 aa12□□□□□ -0.49
HPS3-201ENST00000296051 NCMAPQ5T1S8 102 aa12□□□□□ -0.49
HPS3-201ENST00000296051 RPL7L1Q6DKI1 246 aaKnown RBP12□□□□□ -0.49
HPS3-201ENST00000296051 SFTPA2Q8IWL1 248 aa12□□□□□ -0.49
HPS3-201ENST00000296051 CT55Q8WUE5 264 aa12□□□□□ -0.49
HPS3-201ENST00000296051 POU2F2P09086 479 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 RPUSD3Q6P087 351 aaKnown RBP11.99□□□□□ -0.49
HPS3-201ENST00000296051 PRSS35Q8N3Z0 413 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 TMEM229BQ8NBD8 167 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 NECAP1Q8NC96 275 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 OR6K3Q8NGY3 331 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 MITD1Q8WV92 249 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 A0A1W2PPV9 198 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 C5orf49A4QMS7 147 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 CD300LBA8K4G0 201 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 H3BP45 60 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 SCGB1D1O95968 90 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 SERPINA7P05543 415 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 MEOX1P50221 254 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 FOXF1Q12946 379 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ADIRFQ15847 76 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ZNF660Q6AZW8 331 aaPredicted RBP11.99□□□□□ -0.49
HPS3-201ENST00000296051 LCN15Q6UWW0 184 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 NR2C2APQ86WQ0 139 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ZNF561Q8N587 486 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 NPEPL1Q8NDH3 523 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 KIRREL1Q96J84 757 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 UBL7Q96S82 380 aaPredicted RBP11.99□□□□□ -0.49
HPS3-201ENST00000296051 C9orf170A2RU37 121 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 PHOX2AO14813 284 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ARPC3O15145 178 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 S100A8P05109 93 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 CDAP32320 146 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 MIDNQ504T8 468 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 RBMXL1Q96E39 390 aaKnown RBP11.99□□□□□ -0.49
HPS3-201ENST00000296051 OR2A5Q96R48 311 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 GPR173Q9NS66 373 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ST6GALNAC2Q9UJ37 374 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 TCFL5Q9UL49 500 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ZNF732B4DXR9 585 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ST8SIA3O43173 380 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 TK1P04183 234 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 H2AFB1P0C5Y9 115 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 F2RL1P55085 397 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 H2BFSP57053 126 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 ZNF239Q16600 458 aaKnown RBP11.99□□□□□ -0.49
HPS3-201ENST00000296051 TMEM128Q5BJH2 165 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 C19orf48Q6RUI8 117 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 SLC43A2Q8N370 569 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 SEMA6DQ8NFY4 1073 aa11.99□□□□□ -0.49
HPS3-201ENST00000296051 OR5M8Q8NGP6 311 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms