RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 FUT7Q11130 342 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 CRYGNQ8WXF5 182 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TEAD3Q99594 435 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ST3GAL6Q9Y274 331 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 K7ESM1 405 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 NME1P15531 152 aaKnown RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 ATF1P18846 271 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 NIPSNAP1Q9BPW8 284 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 CBY1Q9Y3M2 126 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TRAV1-2A0A0B4J238 106 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 RFPL4AA6NLU0 287 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 RFPL4AL1F8VTS6 287 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TFAP2AP05549 437 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 OR2W3Q7Z3T1 314 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 IL36GQ9NZH8 169 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 PDCD11Q14690 1871 aaKnown RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 A0A1W2PPC4 97 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 SNRPGP15A8MWD9 76 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ZNF816Q0VGE8 651 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 SMIM14Q96QK8 99 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ZIC5Q96T25 663 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 K7ESF4 209 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 PPP6CO00743 305 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 KLK10O43240 276 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 CTSLP07711 333 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 PARM1Q6UWI2 310 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TMEM108Q6UXF1 575 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TIAM2Q8IVF5 1701 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TLN2Q9Y4G6 2542 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 LINC01553A4QN01 128 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 IFITM5A6NNB3 132 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 JUNBP17275 347 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 MARCH5Q9NX47 278 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 OR1A1Q9P1Q5 309 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ASH2LQ9UBL3 628 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 HNF1AP20823 631 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 CD80P33681 288 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 KLF3P57682 345 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 SOWAHCQ53LP3 525 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 OR4C5Q8NGB2 326 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 CDX4O14627 284 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 PAX5Q02548 391 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 UQCC3Q6UW78 93 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 A0A1W2PPQ1 181 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ZNF17P17021 662 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ID4P47928 161 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 RPL18Q07020 188 aaKnown RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 FOXC1Q12948 553 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 PDZD11Q5EBL8 140 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 WDR73Q6P4I2 378 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 ARRDC1Q8N5I2 433 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 OR6C3Q9NZP0 311 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 SDCBPO00560 298 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 OPRK1P41145 380 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 SLC19A1P41440 591 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 CLDN20P56880 219 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 DUS3LQ96G46 650 aaKnown RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 TINAGL1Q9GZM7 467 aaPredicted RBP8.41□□□□□ -1.06
CUX1-201ENST00000292535 UFC1Q9Y3C8 167 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TMEM128Q5BJH2 165 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 FFAR4Q5NUL3 377 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 SSX7Q7RTT5 188 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 ETFBKMTQ8IXQ9 262 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR1J1Q8NGS3 322 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 PP6455Q8WZ26 134 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 TEX37Q96LM6 180 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR5M11Q96RB7 305 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 ZFHX2Q9C0A1 2572 aaPredicted RBP8.4□□□□□ -1.06
CUX1-201ENST00000292535 GNG3P63215 75 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 IZUMO4Q1ZYL8 232 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 AMIGO3Q86WK7 504 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 CA13Q8N1Q1 262 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR1L4Q8NGR5 311 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 PDXPQ96GD0 296 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 RBM14Q96PK6 669 aaKnown RBP8.4□□□□□ -1.06
CUX1-201ENST00000292535 PGA3P0DJD8 388 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 CRISP2P16562 243 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OPRM1P35372 400 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 GALR1P47211 349 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 TRA2AQ13595 282 aaKnown RBP eCLIP8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR1C1Q15619 314 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 MOGAT2Q3SYC2 334 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 ZNF766Q5HY98 468 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR52N4Q8NGI2 321 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR1F12Q8NHA8 337 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 C19orf43Q9BQ61 176 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR11G2Q8NGC1 345 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 OR5AP2Q8NGF4 316 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 DYNLRB2Q8TF09 96 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 SEC11CQ9BY50 192 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 SLC25A19Q9HC21 320 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 FCGR3BO75015 233 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 PTDSS2Q9BVG9 487 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 MED29Q9NX70 200 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 M0R1X1 148 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 CCKARP32238 428 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 ZNF561Q8N587 486 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 TMED3Q9Y3Q3 217 aa8.4□□□□□ -1.06
CUX1-201ENST00000292535 DIO1P49895 249 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms