RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 RNLSQ5VYX0 342 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 ZNF826PQ6ZT77 177 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 FAM57BQ71RH2 274 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 BOLLQ8N9W6 283 aaKnown RBP8.71□□□□□ -1.02
SNF8-201ENST00000290330 OR52H1Q8NGJ2 320 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 TMIGD2Q96BF3 282 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 ZMYND19Q96E35 227 aaPredicted RBP8.71□□□□□ -1.02
SNF8-201ENST00000290330 REEP6Q96HR9 211 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 ZNF48Q96MX3 618 aaPredicted RBP8.71□□□□□ -1.02
SNF8-201ENST00000290330 NUDT16L1Q9BRJ7 211 aaKnown RBP8.71□□□□□ -1.02
SNF8-201ENST00000290330 MS4A7Q9GZW8 240 aaPredicted RBP8.71□□□□□ -1.02
SNF8-201ENST00000290330 SP140LQ9H930 580 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 ACOT13Q9NPJ3 140 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 PAK1IP1Q9NWT1 392 aaPredicted RBP8.71□□□□□ -1.02
SNF8-201ENST00000290330 C1orf123Q9NWV4 160 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 DNAJC27Q9NZQ0 273 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 CTSZQ9UBR2 303 aa8.71□□□□□ -1.02
SNF8-201ENST00000290330 IGHV3OR16-10A0A075B7F0 116 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 TRAV40A0A0B4J280 105 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 OOEPA6NGQ2 149 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 A6NLC8 198 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 PRODHO43272 600 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 NDUFA2O43678 99 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 SELENOFO60613 162 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 LHBP01229 141 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 MT-ND2P03891 347 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 H2BFMP0C1H6 154 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 CFL1P23528 166 aaKnown RBP8.7□□□□□ -1.02
SNF8-201ENST00000290330 NPY4RP50391 375 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 LSAMPQ13449 338 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 OR8B8Q15620 311 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 KCNJ8Q15842 424 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 SNAPC1Q16533 368 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 SMN1Q16637 294 aaKnown RBP8.7□□□□□ -1.02
SNF8-201ENST00000290330 KLHL12Q53G59 568 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 C9orf139Q6ZV77 190 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 ZNF367Q7RTV3 350 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 WDR86Q86TI4 376 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 ANKRD13BQ86YJ7 626 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 CPOQ8IVL8 374 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 C11orf53Q8IXP5 236 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 C3orf56Q8N813 242 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 ZNF454Q8N9F8 522 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 OR8S1Q8NH09 359 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 TMEM163Q8TC26 289 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 THEM6Q8WUY1 208 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 GGHQ92820 318 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 C12orf43Q96C57 262 aaKnown RBP8.7□□□□□ -1.02
SNF8-201ENST00000290330 C1orf147Q96MC9 270 aaPredicted RBP8.7□□□□□ -1.02
SNF8-201ENST00000290330 DUX5Q96PT3 197 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 CDCA4Q9BXL8 241 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 RGCCQ9H4X1 137 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 BRD7Q9NPI1 651 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 TRIM36Q9NQ86 728 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 CHCHD3Q9NX63 227 aaKnown RBP8.7□□□□□ -1.02
SNF8-201ENST00000290330 TVP23BQ9NYZ1 205 aa8.7□□□□□ -1.02
SNF8-201ENST00000290330 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.7□□□□□ -1.02
SNF8-201ENST00000290330 SOX21Q9Y651 276 aaPredicted RBP8.7□□□□□ -1.02
SNF8-201ENST00000290330 hCG_1807616A0A1W2PRN6 198 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 DNAJC9-AS1A6NH13 148 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 H3BMQ9 156 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 SLC22A1O15245 554 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 ADAM20O43506 726 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 ENSAO43768 121 aaKnown RBP8.69□□□□□ -1.02
SNF8-201ENST00000290330 ENTPD6O75354 484 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 FADS2O95864 444 aaKnown RBP8.69□□□□□ -1.02
SNF8-201ENST00000290330 EGR1P18146 543 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 SLC2A5P22732 501 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 PSMB9P28065 219 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 GSK3AP49840 483 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 FGF12P61328 243 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 ST3GAL4Q11206 333 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 BAMBIQ13145 260 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TMED1Q13445 227 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 GFOD2Q3B7J2 385 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TIMM50Q3ZCQ8 353 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 AWAT1Q58HT5 328 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 SLC35D3Q5M8T2 416 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TEX36Q5VZQ5 186 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TMEM236Q5W0B7 351 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 CD276Q5ZPR3 534 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 FAM90A1Q86YD7 464 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.69□□□□□ -1.02
SNF8-201ENST00000290330 GID4Q8IVV7 300 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TCEANCQ8N8B7 351 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 BBS1Q8NFJ9 593 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 OR1M1Q8NGA1 313 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 UBE2FQ969M7 185 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TMEM80Q96HE8 168 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 PGAM5Q96HS1 289 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 TECTBQ96PL2 329 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 IL4I1Q96RQ9 567 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 OR10A2Q9H208 303 aa8.69□□□□□ -1.02
SNF8-201ENST00000290330 SMURF1Q9HCE7 757 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms