RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ZDHHC23Q8IYP9 409 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ST8SIA1Q92185 356 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ALKBH3Q96Q83 286 aaPredicted RBP13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 OR7C2O60412 319 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 CTXN2P0C2S0 81 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 GSK3AP49840 483 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ADAP1O75689 374 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 RAB5AP20339 215 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 INSM1Q01101 510 aaPredicted RBP13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 SMIM15Q7Z3B0 74 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 LIN7CQ9NUP9 197 aaKnown RBP13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 TRAV34A0A0B4J273 112 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 RER1O15258 196 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 GPR37O15354 613 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 CLEC18AA5D8T8 446 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 SPINK4O60575 86 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 FZD2Q14332 565 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 TMEM196Q5HYL7 178 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 CLEC18CQ8NCF0 446 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 DEFB108BQ8NET1 73 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 FGF14Q92915 247 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 XKRY2A2RUG3 117 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 CDONQ4KMG0 1287 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 C16orf47Q6ZP98 133 aaPredicted RBP13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 ZDHHC22Q8N966 263 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 ASB13Q8WXK3 278 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 MOGAT1Q96PD6 335 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 GPR160Q9UJ42 338 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 LAMB2P55268 1798 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 SCN9AQ15858 1988 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 IGHEP01854 428 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 HNRNPA3P51991 378 aaKnown RBP13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 HES1Q14469 280 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 PNLIPRP3Q17RR3 467 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 SHARPINQ9H0F6 387 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 OBP2AQ9NY56 170 aa13.73□□□□□ -0.21
SHROOM4-201ENST00000289292 PPP1CAP62136 330 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 FBXO17Q96EF6 278 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 C4orf45Q96LM5 186 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 SEC14L6B5MCN3 397 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 HIST1H1DP16402 221 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 DTYMKP23919 212 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 TPPP2P59282 170 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 PMS2P11Q13670 270 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 DRAM2Q6UX65 266 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CXorf67Q86X51 503 aaPredicted RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 SMCHD1A6NHR9 2005 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 ABCD3P28288 659 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 PNLIPRP2P54317 469 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CA10Q9NS85 328 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CST4P01036 141 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 OR5G3P0C626 314 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 GALR1P47211 349 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CLDN15P56746 228 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 RPL7L1Q6DKI1 246 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 ALG14Q96F25 216 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 DHODHQ02127 395 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 TIPARPQ7Z3E1 657 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CDC20BQ86Y33 519 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 KCNIP2Q9NS61 270 aa13.72□□□□□ -0.21
SHROOM4-201ENST00000289292 CDC14BO60729 498 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 CD300LDQ6UXZ3 194 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 OR10V1Q8NGI7 309 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 MRGPRX4Q96LA9 322 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 NPAS1Q99742 590 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 NKX6-3A6NJ46 265 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ABCD4O14678 606 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ARPC3O15145 178 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 TMIGD3P0DMS9 266 aaPredicted RBP13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 SLC25A1P53007 311 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 MYBPHQ13203 477 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 IL10RAQ13651 578 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 COL13A1Q5TAT6 717 aaPredicted RBP13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ADPRHL1Q8NDY3 354 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 NUBPLQ8TB37 319 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ADGRG7Q96K78 797 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ADAT1Q9BUB4 502 aaKnown RBP13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 MRM2Q9UI43 246 aaKnown RBP13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 CHEK1O14757 476 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 KISS1Q15726 138 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 ZNF547Q8IVP9 402 aa13.71□□□□□ -0.21
SHROOM4-201ENST00000289292 SERTM1A2A2V5 107 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 FBXL14Q8N1E6 418 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 EDAQ92838 391 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF17P17021 662 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 FBXL17Q9UF56 701 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 MMP17Q9ULZ9 603 aa13.71□□□□□ -0.22
SHROOM4-201ENST00000289292 PRRC2BQ5JSZ5 2229 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms