RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZDHHC11Q9H8X9 412 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 SLC5A6Q9Y289 635 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 IGHV3-15A0A0B4J1V0 119 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 RFC3P40938 356 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 AGFG1P52594 562 aaKnown RBP11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 RAG2P55895 527 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 MFAP5Q13361 173 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 C17orf78Q8N4C9 275 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF383Q8NA42 475 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 OR52N5Q8NH56 324 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 OR51I2Q9H344 312 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 IL17BQ9UHF5 180 aa11.24□□□□□ -0.61
SLC6A1-201ENST00000287766 SYNGR4O95473 234 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 DCDP81605 110 aaKnown RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 NCR3LG1Q68D85 454 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF429Q86V71 674 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 CPT1CQ8TCG5 803 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 SAT2Q96F10 170 aaPredicted RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 GABRG3Q99928 467 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM173AQ9BQD7 235 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 MMP26Q9NRE1 261 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 WSB1Q9Y6I7 421 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 TP53BP1Q12888 1972 aaPredicted RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM74A7A6NL05 159 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 EFSO43281 561 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 ALOX12BO75342 701 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 DUSP1P28562 367 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 SRPXP78539 464 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 IQCJQ1A5X6 159 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM74A3Q4VXF1 159 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 OR8B4Q96RC9 309 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 PILRAQ9UKJ1 303 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 STRAPQ9Y3F4 350 aaKnown RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 E5RGE8 158 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 SSSCA1O60232 199 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 GLSO94925 669 aaPredicted RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 CST2P09228 141 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 FCER1GP30273 86 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 PTGFRP43088 359 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 PRSS12P56730 875 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 PMP22Q01453 160 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 FOXF1Q12946 379 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 PLA1AQ53H76 456 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 VAMP8Q9BV40 100 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 PLEKHA2Q9HB19 425 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 NSG2Q9Y328 171 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 H0YIG0 161 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 TRAPPC2LH3BP13 241 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 OR2J2O76002 312 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 EGR3Q06889 387 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 LINC00518Q8N0U6 118 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 OR6K3Q8NGY3 331 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 GNPNAT1Q96EK6 184 aaPredicted RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 GPR84Q9NQS5 396 aa11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
SLC6A1-201ENST00000287766 OGG1O15527 345 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 PTP4A3O75365 173 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 GALP22466 123 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 GABRA4P48169 554 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 PMS2P11Q13670 270 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 SP6Q3SY56 376 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 MESTQ5EB52 335 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 DYRK2Q92630 601 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 MSL2Q9HCI7 577 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF331Q9NQX6 463 aaPredicted RBP11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 GPR173Q9NS66 373 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 ZMIZ1Q9ULJ6 1067 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 A0A0B4J293 547 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 M0R143 59 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 ABOP16442 354 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 CALCRP30988 508 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 DVL1P1P54792 670 aaPredicted RBP11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 AWAT1Q58HT5 328 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 TMEM104Q8NE00 496 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 IL22RA2Q969J5 263 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 VN1R1Q9GZP7 353 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 UCK1Q9HA47 277 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 ST6GALNAC2Q9UJ37 374 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 SLC17A2O00624 439 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 TUSC2O75896 110 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 CFDP00746 253 aaPredicted RBP11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 FCARP24071 287 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 EFNB2P52799 333 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 ZNF141Q15928 474 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 EMC4Q5J8M3 183 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 LYSMD4Q5XG99 296 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 C5orf46Q6UWT4 87 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM219AQ8IW50 185 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 OR1L3Q8NH93 324 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms