RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FREM3P0C091 2139 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 LMX1BO60663 402 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 CA11O75493 328 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 SFT2D2O95562 160 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 KLK3P07288 261 aaPredicted RBP9.17□□□□□ -0.94
SKA1-201ENST00000285116 OR8U9P0C7N5 309 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 ALDH3B1P43353 468 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 OR2B8PP59922 312 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 HSF1Q00613 529 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 ZP2Q05996 745 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 RHEBQ15382 184 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 ZNF239Q16600 458 aaKnown RBP9.17□□□□□ -0.94
SKA1-201ENST00000285116 SLC22A6Q4U2R8 563 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 NCMAPQ5T1S8 102 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 TMEM268Q5VZI3 342 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 LHFPL1Q86WI0 220 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 FAM24BQ8N5W8 94 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 OR52N4Q8NGI2 321 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 OR8U1Q8NH10 309 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 SLAMF6Q96DU3 332 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 FOXN4Q96NZ1 517 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 TGM7Q96PF1 710 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 LPAR5Q9H1C0 372 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 PCNX3Q9H6A9 2034 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 TECTAO75443 2155 aa9.17□□□□□ -0.94
SKA1-201ENST00000285116 IGLV3-32A0A0A0MS00 114 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 A0A1W2PR77 199 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 ADAP1O75689 374 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 HOXB5P09067 269 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 HLA-DOBP13765 273 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 HOXA5P20719 270 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 FBLP22087 321 aaKnown RBP9.16□□□□□ -0.94
SKA1-201ENST00000285116 FPR2P25090 351 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 MAS1LP35410 378 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 HSD11B2P80365 405 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 KLHL24Q6TFL4 600 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 TTLL10Q6ZVT0 673 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.16□□□□□ -0.94
SKA1-201ENST00000285116 D2HGDHQ8N465 521 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 BHLHE23Q8NDY6 225 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 OR1J1Q8NGS3 322 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 ADAT3Q96EY9 351 aaPredicted RBP9.16□□□□□ -0.94
SKA1-201ENST00000285116 C2orf50Q96LR7 162 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 OR11A1Q9GZK7 315 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 TGIF2Q9GZN2 237 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 FLVCR1Q9Y5Y0 555 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 SYT7O43581 403 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 RD3LP0DJH9 198 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 FOXK1P85037 733 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 C17orf67Q0P5P2 114 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 IL15RAQ13261 267 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 RAB32Q13637 225 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
SKA1-201ENST00000285116 THEM4Q5T1C6 240 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 KDM8Q8N371 416 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 FAM89BQ8N5H3 189 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 OR56B1Q8NGI3 324 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 OR10S1Q8NGN2 331 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 KCNG3Q8TAE7 436 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 GTF3AQ92664 365 aaKnown RBP9.16□□□□□ -0.94
SKA1-201ENST00000285116 DDIT4LQ96D03 193 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 SLC26A1Q9H2B4 701 aa9.16□□□□□ -0.94
SKA1-201ENST00000285116 LOC101059948A0A1B0GTJ6 334 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 LIPT2A6NK58 231 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 JTBO76095 146 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 TSPAN15O95858 294 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 PMP2P02689 132 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 GAPDHP04406 335 aaKnown RBP9.15□□□□□ -0.94
SKA1-201ENST00000285116 HIST1H1DP16402 221 aaKnown RBP9.15□□□□□ -0.94
SKA1-201ENST00000285116 OR1D4P47884 311 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 SULT1A1P50225 295 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 RAB1AP62820 205 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 POMZP3Q6PJE2 187 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 CLEC18BQ6UXF7 455 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 Q6ZSR3 168 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 HIST2H3AQ71DI3 136 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 KMT5CQ86Y97 462 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 OR5AS1Q8N127 324 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 POC1AQ8NBT0 407 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 OR4K15Q8NH41 348 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 C11orf40Q8WZ69 217 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 TMEM230Q96A57 120 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 CMBLQ96DG6 245 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 NRSN2Q9GZP1 204 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 PCED1AQ9H1Q7 454 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 SMOC1Q9H4F8 434 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 SPACA1Q9HBV2 294 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 PI4KAP42356 2102 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 PHF3Q92576 2039 aaKnown RBP9.15□□□□□ -0.94
SKA1-201ENST00000285116 C17orf51A8MQB3 221 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.94
SKA1-201ENST00000285116 ZNF217O75362 1048 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 HKR1P10072 659 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 DAOP14920 347 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 ITGA3P26006 1051 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 MSX1P28360 303 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 S100A2P29034 98 aa9.15□□□□□ -0.94
SKA1-201ENST00000285116 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.94
SKA1-201ENST00000285116 ID4P47928 161 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms