RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SFXN2Q96NB2 322 aa2.55□□□□□ -2
HERC4-201ENST00000277817 SORCS2Q96PQ0 1159 aa2.55□□□□□ -2
HERC4-201ENST00000277817 PRRT1Q99946 306 aa2.55□□□□□ -2
HERC4-201ENST00000277817 SMIM3Q9BZL3 60 aa2.55□□□□□ -2
HERC4-201ENST00000277817 STRADBQ9C0K7 418 aa2.55□□□□□ -2
HERC4-201ENST00000277817 SLC26A1Q9H2B4 701 aa2.55□□□□□ -2
HERC4-201ENST00000277817 SAV1Q9H4B6 383 aaPredicted RBP2.55□□□□□ -2
HERC4-201ENST00000277817 AKIRIN1Q9H9L7 192 aaPredicted RBP2.55□□□□□ -2
HERC4-201ENST00000277817 NPAP1Q9NZP6 1156 aa2.55□□□□□ -2
HERC4-201ENST00000277817 KCNS2Q9ULS6 477 aa2.55□□□□□ -2
HERC4-201ENST00000277817 FLVCR2Q9UPI3 526 aa2.55□□□□□ -2
HERC4-201ENST00000277817 CABIN1Q9Y6J0 2220 aa2.55□□□□□ -2
HERC4-201ENST00000277817 AKAP9Q99996 3911 aa2.55□□□□□ -2
HERC4-201ENST00000277817 A8MVM7 634 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CTDSPLO15194 276 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TNFSF12O43508 249 aa2.54□□□□□ -2
HERC4-201ENST00000277817 NKX2-2O95096 273 aa2.54□□□□□ -2
HERC4-201ENST00000277817 NTN1O95631 604 aa2.54□□□□□ -2
HERC4-201ENST00000277817 EIF4EP06730 217 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 HBQ1P09105 142 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CD79AP11912 226 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SPI1P17947 270 aa2.54□□□□□ -2
HERC4-201ENST00000277817 APOBEC1P41238 236 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 EMDP50402 254 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CAV2P51636 162 aa2.54□□□□□ -2
HERC4-201ENST00000277817 HMGA2P52926 109 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CLDN6P56747 220 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RAP2BP61225 183 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CYCSP99999 105 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 CFHR3Q02985 330 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CDC20Q12834 499 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RBMS2Q15434 407 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 SLC36A2Q495M3 483 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF585AQ6P3V2 769 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CORO6Q6QEF8 472 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PQLC2Q6ZP29 291 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SLC16A9Q7RTY1 509 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DCXRQ7Z4W1 244 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SGPP2Q8IWX5 399 aa2.54□□□□□ -2
HERC4-201ENST00000277817 KLHDC8BQ8IXV7 354 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CA13Q8N1Q1 262 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PRSS33Q8NF86 280 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR51S1Q8NGJ8 323 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR6F1Q8NGZ6 308 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR14A16Q8NHC5 309 aa2.54□□□□□ -2
HERC4-201ENST00000277817 APH1BQ8WW43 257 aa2.54□□□□□ -2
HERC4-201ENST00000277817 GCDHQ92947 438 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 KIAA1143Q96AT1 154 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 RNF170Q96K19 258 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DOK1Q99704 481 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PLA2G2FQ9BZM2 168 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR11A1Q9GZK7 315 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TCEAL2Q9H3H9 227 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 C1orf198Q9H425 327 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RGCCQ9H4X1 137 aa2.54□□□□□ -2
HERC4-201ENST00000277817 EVA1AQ9H8M9 152 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PLSCR3Q9NRY6 295 aa2.54□□□□□ -2
HERC4-201ENST00000277817 B4GALT7Q9UBV7 327 aa2.54□□□□□ -2
HERC4-201ENST00000277817 KCNE5Q9UJ90 142 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CDC42EP3Q9UKI2 254 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF346Q9UL40 294 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 PCM1Q15154 2024 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ARRDC5A6NEK1 342 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TLCD2A6NGC4 264 aa2.54□□□□□ -2
HERC4-201ENST00000277817 VWC2LB2RUY7 222 aa2.54□□□□□ -2
HERC4-201ENST00000277817 C2CD4DB7Z1M9 353 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CTSVO60911 334 aa2.54□□□□□ -2
HERC4-201ENST00000277817 WISP3O95389 354 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF35P13682 527 aa2.54□□□□□ -2
HERC4-201ENST00000277817 BDKRB2P30411 391 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CRYBB2P43320 205 aa2.54□□□□□ -2
HERC4-201ENST00000277817 GFERP55789 205 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CLDN17P56750 224 aa2.54□□□□□ -2
HERC4-201ENST00000277817 UBE2MP61081 183 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 MEF2DQ14814 521 aa2.54□□□□□ -2
HERC4-201ENST00000277817 MLF2Q15773 248 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 SSX1Q16384 188 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SLC25A35Q3KQZ1 300 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DMRTC1Q5HYR2 192 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ABHD17BQ5VST6 288 aa2.54□□□□□ -2
HERC4-201ENST00000277817 C1orf140Q5VVS0 124 aa2.54□□□□□ -2
HERC4-201ENST00000277817 LYSMD4Q5XG99 296 aa2.54□□□□□ -2
HERC4-201ENST00000277817 STEAP1BQ6NZ63 245 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ANKRD16Q6P6B7 361 aa2.54□□□□□ -2
HERC4-201ENST00000277817 KIRREL2Q6UWL6 708 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TMPPEQ6ZT21 453 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PRSS41Q7RTY9 318 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CCDC190Q86UF4 302 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ANGPTL5Q86XS5 388 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR7G1Q8NGA0 311 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR4Q3Q8NH05 313 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR4C3Q8NH37 302 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR6S1Q8NH40 331 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR4K15Q8NH41 348 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SCGB1C1Q8TD33 95 aa2.54□□□□□ -2
HERC4-201ENST00000277817 NUDCD2Q8WVJ2 157 aa2.54□□□□□ -2
HERC4-201ENST00000277817 HSD17B8Q92506 261 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TSLPQ969D9 159 aa2.54□□□□□ -2
HERC4-201ENST00000277817 FCRL1Q96LA6 429 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DERL3Q96Q80 235 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms