RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TMEM8BA6NDV4 472 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 WIPF3A6NGB9 483 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 H7C417 338 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 SULT1C2O00338 296 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 CHRM2P08172 466 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 IL32P24001 234 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 PLA2G5P39877 138 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 FAM189A2Q15884 450 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 TIMM23BQ5SRD1 257 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 PLCXD3Q63HM9 321 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 OR5D18Q8NGL1 313 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 BORCS8Q96FH0 119 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 MOV10Q9HCE1 1003 aaKnown RBP14.08□□□□□ -0.16
TPM1-201ENST00000267996 KLK11Q9UBX7 282 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 MTFP1Q9UDX5 166 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 A0A0A6YYD4 124 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 FAM230AA0A1W2PPH8 454 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ZNF850A8MQ14 1090 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 SLC6A1P30531 599 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 PRSS3P35030 304 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ATP1B3P54709 279 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 PPP1CBP62140 327 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 PRDX4Q13162 271 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 C3orf36Q3SXR2 165 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ZNF260Q3ZCT1 412 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 SLC22A6Q4U2R8 563 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 MRGPRGQ86SM5 289 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 FAM89BQ8N5H3 189 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ACBD4Q8NC06 268 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ENKURQ8TC29 256 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 GPX8Q8TED1 209 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 AQP3Q92482 292 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 GAL3ST1Q99999 423 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 TMEM59Q9BXS4 323 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 CST11Q9H112 138 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 SCPEP1Q9HB40 452 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 GPR160Q9UJ42 338 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ING4Q9UNL4 249 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 A0A1W2PP11 408 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ANKRD20A5PA0PJZ0 165 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 PQLC2LA1A4F0 135 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 MPIG6BO95866 241 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 ECDO95905 644 aaPredicted RBP14.07□□□□□ -0.16
TPM1-201ENST00000267996 MELTFP08582 738 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 CECR9P0C854 216 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 BTCP35070 178 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 UCP2P55851 309 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 RPS27AP62979 156 aaKnown RBP14.07□□□□□ -0.16
TPM1-201ENST00000267996 SSBP1Q04837 148 aaKnown RBP14.07□□□□□ -0.16
TPM1-201ENST00000267996 FTMTQ8N4E7 242 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 CELF2-AS1Q8N7Q2 184 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 KDF1Q8NAX2 398 aaPredicted RBP14.07□□□□□ -0.16
TPM1-201ENST00000267996 PXT1Q8NFP0 134 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 HPSE2Q8WWQ2 592 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 PAPOLGQ9BWT3 736 aaKnown RBP14.07□□□□□ -0.16
TPM1-201ENST00000267996 TM2D1Q9BX74 207 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 C1QTNF6Q9BXI9 259 aa14.07□□□□□ -0.16
TPM1-201ENST00000267996 FGF23Q9GZV9 251 aaPredicted RBP14.07□□□□□ -0.16
TPM1-201ENST00000267996 ZZEF1O43149 2961 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 FAM240BA0A1B0GVZ2 78 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 MED19A0JLT2 244 aaPredicted RBP14.06□□□□□ -0.16
TPM1-201ENST00000267996 GSTT2BP0CG30 244 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 TUBG1P23258 451 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 AP3S2P59780 193 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 CEACAM21Q3KPI0 293 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 PLA1AQ53H76 456 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 ZDHHC23Q8IYP9 409 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 CADM3Q8N126 398 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 OR10R2Q8NGX6 335 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 S100PBPQ96BU1 408 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 SEH1LQ96EE3 360 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 DMRTA2Q96SC8 542 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 URM1Q9BTM9 101 aaKnown RBP14.06□□□□□ -0.16
TPM1-201ENST00000267996 OR51B6Q9H340 312 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 BANF2Q9H503 90 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 TUBG2Q9NRH3 451 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 JKAMPQ9P055 326 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 MPC1Q9Y5U8 109 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 POLEQ07864 2286 aa14.06□□□□□ -0.16
TPM1-201ENST00000267996 DSPP15924 2871 aaKnown RBP14.05□□□□□ -0.16
TPM1-201ENST00000267996 CENPXA8MT69 81 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 FOXI3A8MTJ6 420 aaPredicted RBP14.05□□□□□ -0.16
TPM1-201ENST00000267996 CRTAPO75718 401 aaPredicted RBP14.05□□□□□ -0.16
TPM1-201ENST00000267996 RBBP9O75884 186 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 TMEM225BP0DP42 221 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 SFTPCP11686 197 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 RAC2P15153 192 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 BMP5P22003 454 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 VEGFCP49767 419 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 GUCA2AQ02747 115 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 PDZK1IP1Q13113 114 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 ZSCAN4Q8NAM6 433 aaPredicted RBP14.05□□□□□ -0.16
TPM1-201ENST00000267996 STEAP2Q8NFT2 490 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 DEDD2Q8WXF8 326 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 CMBLQ96DG6 245 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 S100A13Q99584 98 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 VKORC1Q9BQB6 163 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 NICN1Q9BSH3 213 aa14.05□□□□□ -0.16
TPM1-201ENST00000267996 OR2J1Q9GZK6 312 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms