RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ERGIC1Q969X5 290 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 PRRX2Q99811 253 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 CCDC3Q9BQI4 270 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 ATG2BQ96BY7 2078 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 BORCS7-ASMTA0A0B4J1R7 106 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 MED19A0JLT2 244 aaPredicted RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 TLCD2A6NGC4 264 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 C2CD4DB7Z1M9 353 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 DLEU1O43261 78 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 ZNF217O75362 1048 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 DEDDO75618 318 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 IL18BPO95998 194 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 WASP42768 502 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 GABRA4P48169 554 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 AFF3P51826 1226 aaKnown RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 CEBPGP53567 150 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 IAH1Q2TAA2 248 aaPredicted RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 C1orf100Q5SVJ3 147 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 ALKBH2Q6NS38 261 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 PRR18Q8N4B5 295 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 HSD17B11Q8NBQ5 300 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 SNIP1Q8TAD8 396 aaKnown RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 RNASEH2CQ8TDP1 164 aaKnown RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 GABRG3Q99928 467 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 RTBDNQ9BSG5 229 aaPredicted RBP11.62□□□□□ -0.55
NUP54-201ENST00000264883 PITPNC1Q9UKF7 332 aa11.62□□□□□ -0.55
NUP54-201ENST00000264883 M0R143 59 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 CRYABP02511 175 aaKnown RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 OR5H8P0DN80 308 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 FPR2P25090 351 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 HSD17B7P56937 341 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 ROM1Q03395 351 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 RPL18Q07020 188 aaKnown RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 OTPQ5XKR4 325 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 KCTD18Q6PI47 426 aaPredicted RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 SLC35D2Q76EJ3 337 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 PLPP5Q8NEB5 264 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 BSCL2Q96G97 398 aaPredicted RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 FAM210BQ96KR6 192 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 SNX22Q96L94 193 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 DGAT2Q96PD7 388 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 SCGB3A2Q96PL1 93 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 CDX2Q99626 313 aaPredicted RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 LPAR4Q99677 370 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 GINS3Q9BRX5 216 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 LRIT1Q9P2V4 623 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 CEACAM18A8MTB9 384 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 H0YL77 283 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 HSD17B6O14756 317 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 SCGNO76038 276 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 CT45A8P0DMV1 189 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 CT45A9P0DMV2 189 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 KLK2P20151 261 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 GALNSP34059 522 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 GLIPR1P48060 266 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 MFGE8Q08431 387 aaPredicted RBP11.61□□□□□ -0.55
NUP54-201ENST00000264883 CT45A2Q5DJT8 189 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 TMEM196Q5HYL7 178 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 FNDC7Q5VTL7 733 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 SLC18B1Q6NT16 456 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 OOSP2Q86WS3 158 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 OR13C3Q8NGS6 347 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 DTD1Q8TEA8 209 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 METTL21AQ8WXB1 218 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 TMEM208Q9BTX3 173 aa11.61□□□□□ -0.55
NUP54-201ENST00000264883 TOX3O15405 576 aaPredicted RBP11.6□□□□□ -0.55
NUP54-201ENST00000264883 PGA4P0DJD7 388 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 PGA5P0DJD9 388 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 GIMD1P0DJR0 217 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 NTSR1P30989 418 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 SEC13P55735 322 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 FUT7Q11130 342 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 PEG10Q86TG7 708 aaKnown RBP11.6□□□□□ -0.55
NUP54-201ENST00000264883 ZNF429Q86V71 674 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 TMEM183AQ8IXX5 376 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 NKAIN3Q8N8D7 197 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 OR2I1PQ8NGU4 316 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 OR4C3Q8NH37 302 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 SPACA7Q96KW9 195 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 GPR87Q9BY21 358 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 PLEKHA2Q9HB19 425 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 RBFOX3A6NFN3 312 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 XKRYO14609 159 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 TGOLN2O43493 480 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 GPR3P46089 330 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 SLC6A8P48029 635 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 UNC119Q13432 240 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 VAX1Q5SQQ9 334 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 Q7L0L9 218 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 RTN4RL2Q86UN3 420 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 C1orf87Q8N0U7 546 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 TMEM156Q8N614 296 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 RCC1LQ96I51 464 aaKnown RBP11.6□□□□□ -0.55
NUP54-201ENST00000264883 SHDQ96IW2 340 aa11.6□□□□□ -0.55
NUP54-201ENST00000264883 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms