RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 WDR13Q9H1Z4 485 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 PRDM13Q9H4Q3 707 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 CNTD2Q9H8S5 307 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 OAZ3Q9UMX2 235 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 A0A1B0GW55 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 ZNF732B4DXR9 585 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 ZNF670-ZNF695F2Z2N8 137 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 GPR37O15354 613 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 AKR7A2O43488 359 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 TTRP02766 147 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L2P0CJ85 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L3P0CJ86 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L4P0CJ87 422 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L5P0CJ88 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L6P0CJ89 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L7P0CJ90 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 HKR1P10072 659 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 GPM6AP51674 278 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 ARF6P62330 175 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 GNG3P63215 75 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 MFGE8Q08431 387 aaPredicted RBP13.29□□□□□ -0.28
USE1-201ENST00000263897 SLC9A3R2Q15599 337 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 METTL11BQ5VVY1 283 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4L9Q6RFH8 374 aaPredicted RBP13.29□□□□□ -0.28
USE1-201ENST00000263897 MOB3CQ70IA8 216 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 THAP5Q7Z6K1 395 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 COMMD2Q86X83 199 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 ELMOD2Q8IZ81 293 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 FGFRL1Q8N441 504 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 ST8SIA4Q92187 359 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 SLC25A28Q96A46 364 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DMRTB1Q96MA1 342 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 RAB3IPQ96QF0 476 aaPredicted RBP13.29□□□□□ -0.28
USE1-201ENST00000263897 GABARAPL3Q9BY60 117 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 SIRPDQ9H106 197 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DNTTIP1Q9H147 329 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 OR51I2Q9H344 312 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DNAJB11Q9UBS4 358 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 DUX4Q9UBX2 424 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 WARS2Q9UGM6 360 aaKnown RBP13.29□□□□□ -0.28
USE1-201ENST00000263897 RPUSD1Q9UJJ7 312 aaKnown RBP13.29□□□□□ -0.28
USE1-201ENST00000263897 PIGLQ9Y2B2 252 aa13.29□□□□□ -0.28
USE1-201ENST00000263897 CENPVL3A0A0U1RRI6 287 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 LOC110117498-PIK3R3F6TDL0 507 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 NDUFB3O43676 98 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 MTRF1O75570 445 aaKnown RBP13.28□□□□□ -0.28
USE1-201ENST00000263897 RNASE1P07998 156 aaKnown RBP13.28□□□□□ -0.28
USE1-201ENST00000263897 GMFBP60983 142 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 EGR3Q06889 387 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 PDCD1Q15116 288 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 DEFB112Q30KQ8 113 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 AWAT1Q58HT5 328 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 CEP78Q5JTW2 689 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 STUMQ69YW2 141 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 FAM216BQ8N7L0 139 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 LY6G5BQ8NDX9 201 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 OR51G2Q8NGK0 314 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 OR8J1Q8NGP2 316 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 MED30Q96HR3 178 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 SNTG1Q9NSN8 517 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 MRM2Q9UI43 246 aaKnown RBP13.28□□□□□ -0.28
USE1-201ENST00000263897 ENPP5Q9UJA9 477 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 GTF2A1LQ9UNN4 478 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 R4GMQ9 66 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 ANK2Q01484 3957 aa13.28□□□□□ -0.28
USE1-201ENST00000263897 A0A1B0GTI1 187 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 MDFIC2A0A1B0GVS7 189 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 SAC3D1A6NKF1 404 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 OR5B21A6NL26 309 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 RHBDL1O75783 438 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 DHRS3O75911 302 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 NRASP01111 189 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 FAHP16930 419 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 HTR1FP30939 366 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 FOXL1Q12952 345 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 IKZF1Q13422 519 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 LRRC10Q5BKY1 277 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 ZNF788Q6ZQV5 615 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 ANGPTL6Q8NI99 470 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 ZNF671Q8TAW3 534 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 PYDC1Q8WXC3 89 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 RBM4BQ9BQ04 359 aaKnown RBP13.27□□□□□ -0.29
USE1-201ENST00000263897 RIBC2Q9H4K1 309 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 MOB1AQ9H8S9 216 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 SNX5Q9Y5X3 404 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 KPTNQ9Y664 436 aa13.27□□□□□ -0.29
USE1-201ENST00000263897 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
USE1-201ENST00000263897 OR2T7P0C7T2 308 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 GLRA1P23415 457 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 CDONQ4KMG0 1287 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 RUSC1-AS1Q66K80 236 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 Q6YL49 198 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 PLEKHG7Q6ZR37 379 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 Q6ZSR3 168 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms