RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FBXL14Q8N1E6 418 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 MFRPQ9BY79 579 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 DCAF16Q9NXF7 216 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 WSB1Q9Y6I7 421 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 LINC01553A4QN01 128 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 MASP2O00187 686 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 RER1O15258 196 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 HSBP1O75506 76 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 MPC2O95563 127 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 IL5P05113 134 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 RPL34P49207 117 aaKnown RBP10.81□□□□□ -0.68
SMG6-201ENST00000263073 FAM209AQ5JX71 171 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 THSD4Q6ZMP0 1018 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 C16orf47Q6ZP98 133 aaPredicted RBP10.81□□□□□ -0.68
SMG6-201ENST00000263073 MOB1AQ9H8S9 216 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 NTMQ9P121 344 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 NAT8BQ9UHF3 227 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 SIGLEC7Q9Y286 467 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 CTXN2P0C2S0 81 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 SULT1A3P0DMM9 295 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 SULT1A4P0DMN0 295 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 CSN1S1P47710 185 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 GNG10P50151 68 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 PLA1AQ53H76 456 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 KHDC1LQ5JSQ8 128 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 SPNS3Q6ZMD2 512 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 OXGR1Q96P68 337 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 EVPLQ92817 2033 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 USP54Q70EL1 1684 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 CDC42EP2O14613 210 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 ELFN2Q5R3F8 820 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 MRPS24Q96EL2 167 aaKnown RBP10.81□□□□□ -0.68
SMG6-201ENST00000263073 DOK1Q99704 481 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 EDEM2Q9BV94 578 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 A0A087WUJ7 227 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 TRBV5-4A0A0C4DH59 114 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 FAM78BQ5VT40 261 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 UQCC3Q6UW78 93 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 MEGF10Q96KG7 1140 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 IGHV3-43A0A0B4J1X8 118 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 IGHV3-43DP0DP04 118 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 RRADP55042 308 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 DHODHQ02127 395 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 AWAT1Q58HT5 328 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 ZNF628Q5EBL2 1059 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 TGIF2LXQ8IUE1 241 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 FBXL17Q9UF56 701 aa10.81□□□□□ -0.68
SMG6-201ENST00000263073 CDRT15L2A8MXV6 281 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 GALR2O43603 387 aaPredicted RBP10.8□□□□□ -0.68
SMG6-201ENST00000263073 OR5AC1P0C628 307 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 SUB1P53999 127 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG6-201ENST00000263073 TAS2R45P59539 299 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 EXTL1Q92935 676 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 MS4A10Q96PG2 267 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ELOVL1Q9BW60 279 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 DOK5Q9P104 306 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 SIT1Q9Y3P8 196 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 LANCL1O43813 399 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 CST4P01036 141 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ZNF383Q8NA42 475 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 BLNKQ8WV28 456 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 FAM210BQ96KR6 192 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ASB16Q96NS5 453 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 SLC2A8Q9NY64 477 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 IL20Q9NYY1 176 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 C1QCP02747 245 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 GAMTQ14353 236 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 C9orf62Q8N4C0 152 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 OR4D10Q8NGI6 311 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 S1PR3Q99500 378 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 CNTD2Q9H8S5 307 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 LIPGQ9Y5X9 500 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 PEX11BO96011 259 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 DPTQ07507 201 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 C19orf57Q0VDD7 668 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 CST9Q5W186 159 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ARHGEF39Q8N4T4 335 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 OR10AC1Q8NH08 325 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 IFI44Q8TCB0 444 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 MIXL1Q9H2W2 232 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 POMT1Q9Y6A1 747 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 LRRC30A6NM36 301 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 KLRC4-KLRK1H3BQV0 150 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 PLPP2O43688 288 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ZNF737O75373 536 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 WNT11O96014 354 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 HPXP02790 462 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 CEACAM5P06731 702 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 PATE4P0C8F1 98 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ZBTB25P24278 435 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 FPR2P25090 351 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 CDKN2AP42771 156 aaKnown RBP10.8□□□□□ -0.68
SMG6-201ENST00000263073 KIAA0040Q15053 153 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 LGALSLQ3ZCW2 172 aaPredicted RBP10.8□□□□□ -0.68
SMG6-201ENST00000263073 VWA1Q6PCB0 445 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 MYPOPQ86VE0 399 aaPredicted RBP10.8□□□□□ -0.68
SMG6-201ENST00000263073 NOXO1Q8NFA2 376 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 TSPAN32Q96QS1 320 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms