RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CPNE4Q96A23 557 aaPredicted RBP11.87□□□□□ -0.51
VMP1-201ENST00000262291 FOXB1Q99853 325 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 NOX3Q9HBY0 568 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 MTFP1Q9UDX5 166 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 SVILO95425 2214 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 MGAQ8IWI9 3026 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 GPR31O00270 319 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 LDLRAD4O15165 306 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 CYTIPO60759 359 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 ECDO95905 644 aaPredicted RBP11.87□□□□□ -0.51
VMP1-201ENST00000262291 CCL2P13500 99 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 GNB3P16520 340 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 FAM27BQ5VT28 67 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 ELP2Q6IA86 826 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 FOXL2NBQ6ZUU3 175 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 C1QL2Q7Z5L3 287 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 NKAIN3Q8N8D7 197 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 PRSS33Q8NF86 280 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 SEH1LQ96EE3 360 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 SLC7A10Q9NS82 523 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 TINAGQ9UJW2 476 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 PIGLQ9Y2B2 252 aa11.87□□□□□ -0.51
VMP1-201ENST00000262291 LOC100509620A0A075B734 347 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 FXYD6-FXYD2A0A087WZ82 144 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 RAB19A4D1S5 217 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 MRPL33O75394 65 aaKnown RBP11.86□□□□□ -0.51
VMP1-201ENST00000262291 RP2O75695 350 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 MPIG6BO95866 241 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 RLN2P04090 185 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 HPNP05981 417 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 HTR5AP47898 357 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 ZNF133P52736 654 aaPredicted RBP11.86□□□□□ -0.51
VMP1-201ENST00000262291 AKR1C2P52895 323 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 AP3S2P59780 193 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 AKR1C1Q04828 323 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 DOK3Q7L591 496 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 SLC16A14Q7RTX9 510 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 GVQW1Q8N7I0 195 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 MDS2Q8NDY4 140 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 OR51S1Q8NGJ8 323 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 SCARB1Q8WTV0 552 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 FXYD6Q9H0Q3 95 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 MOB1AQ9H8S9 216 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 MRPS28Q9Y2Q9 187 aaKnown RBP11.86□□□□□ -0.51
VMP1-201ENST00000262291 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 LCATP04180 440 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 RLN1P04808 185 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 CBR1P16152 277 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 CCNOP22674 350 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
VMP1-201ENST00000262291 PSG4Q00888 419 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 UBE2V2Q15819 145 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 SWI5Q1ZZU3 235 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 SELENOIQ9C0D9 397 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 C12orf49Q9H741 205 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 GPR173Q9NS66 373 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 NPTNQ9Y639 398 aa11.86□□□□□ -0.51
VMP1-201ENST00000262291 TTLL8A6PVC2 850 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 PYCARD-AS1I3L0S3 204 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 DNPH1O43598 174 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 NME2P1O60361 137 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 GABRA1P14867 456 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 NME2P22392 152 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 CFPP27918 469 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 NKPD1Q17RQ9 610 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 HSD17B13Q7Z5P4 300 aaPredicted RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 SGK3Q96BR1 496 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 INTS12Q96CB8 462 aaKnown RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 C7orf50Q9BRJ6 194 aaKnown RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 ELL3Q9HB65 397 aaPredicted RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 GVINP1Q7Z2Y8 2422 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 DSPP15924 2871 aaKnown RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 SYNGR3O43761 229 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 TMEM127O75204 238 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 PEX14O75381 377 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 EIF3GO75821 320 aaKnown RBP eCLIP11.85□□□□□ -0.51
VMP1-201ENST00000262291 ZNF708P17019 499 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 ACKR3P25106 362 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 S100A11P31949 105 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 SCAND1P57086 179 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 ZNF766Q5HY98 468 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 OR52W1Q6IF63 320 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 BPIFCQ8NFQ6 507 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 FDCSPQ8NFU4 85 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 OR1F12Q8NHA8 337 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 GINS4Q9BRT9 223 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 ZNF552Q9H707 407 aaPredicted RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 ASCL3Q9NQ33 180 aa11.85□□□□□ -0.51
VMP1-201ENST00000262291 MRPS18CQ9Y3D5 142 aaKnown RBP11.85□□□□□ -0.51
VMP1-201ENST00000262291 A0A0A6YYD4 124 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 FAM25EA8MYX2 175 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 RAB27BO00194 218 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms