RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 AKR7A2O43488 359 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 KRASP01116 189 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 CCR9P51686 369 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 LIMK1P53667 647 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 MESP2Q0VG99 397 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 AQP6Q13520 282 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 SNTB1Q13884 538 aaKnown RBP10.87□□□□□ -0.67
SPG11-201ENST00000261866 RNFT1Q5M7Z0 435 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 BHLHA15Q7RTS1 189 aaPredicted RBP10.87□□□□□ -0.67
SPG11-201ENST00000261866 BLNKQ8WV28 456 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 ALG14Q96F25 216 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 DDOQ99489 341 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 ZFP64Q9NPA5 681 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 NUP205Q92621 2012 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 TCTAP57738 103 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 H3F3AP84243 136 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 PXT1Q8NFP0 134 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 CYR61O00622 381 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 PSG11Q9UQ72 335 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 GATCO43716 136 aaKnown RBP10.87□□□□□ -0.67
SPG11-201ENST00000261866 APOBEC4Q8WW27 367 aaKnown RBP10.87□□□□□ -0.67
SPG11-201ENST00000261866 YIPF5Q969M3 257 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 RPEQ96AT9 228 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 KLK11Q9UBX7 282 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 PPIL1Q9Y3C6 166 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 A0A0A6YYJ9 748 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 SULT1A3P0DMM9 295 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 SULT1A4P0DMN0 295 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 WFDC3Q8IUB2 231 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 LYSMD2Q8IV50 215 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 FAM109AQ8N4B1 249 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 EXTL1Q92935 676 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 SPACA1Q9HBV2 294 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 DNAJB12Q9NXW2 375 aaKnown RBP10.87□□□□□ -0.67
SPG11-201ENST00000261866 CCDC88CQ9P219 2028 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 UBE2L5PA0A1B0GUS4 154 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 COX7A2P2O60397 106 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 MPGP29372 298 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 FUT6P51993 359 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 PPP1CBP62140 327 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 CDK5R1Q15078 307 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 MFSD4AQ8N468 514 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 FAM26EQ8N5C1 309 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 SMIM19Q96E16 107 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 SRRQ9GZT4 340 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 KCNIP2Q9NS61 270 aa10.87□□□□□ -0.67
SPG11-201ENST00000261866 TMEM129A0AVI4 362 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 CDK2AP1O14519 115 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 TMPRSS2O15393 492 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 FCGR3BO75015 233 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 TNFRSF1AP19438 455 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 LIN7CQ9NUP9 197 aaKnown RBP10.86□□□□□ -0.67
SPG11-201ENST00000261866 FLRT3Q9NZU0 649 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 CCL21O00585 134 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 OR10P1Q8NGE3 313 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 OR13C8Q8NGS7 320 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 CBY3A6NI87 242 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 AKR1C3P42330 323 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 THSD4Q6ZMP0 1018 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 MRGPRDQ8TDS7 321 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 LRRC3BQ96PB8 259 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 NDUFB11Q9NX14 153 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 RCL1Q9Y2P8 373 aaKnown RBP10.86□□□□□ -0.67
SPG11-201ENST00000261866 RAB19A4D1S5 217 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 CD1EP15812 388 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 FGF7P21781 194 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 RNPS1Q15287 305 aaKnown RBP10.86□□□□□ -0.67
SPG11-201ENST00000261866 TMEM108Q6UXF1 575 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 FAAP24Q9BTP7 215 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 GABARAPL3Q9BY60 117 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
SPG11-201ENST00000261866 CYTIPO60759 359 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 CELA2AP08217 269 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 NPY1RP25929 384 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 HIKESHIQ53FT3 197 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 DND1Q8IYX4 353 aaKnown RBP10.86□□□□□ -0.67
SPG11-201ENST00000261866 DOK5Q9P104 306 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 M0QZ24 198 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 ST8SIA3O43173 380 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 PNLIPP16233 465 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 KLF3P57682 345 aaPredicted RBP10.86□□□□□ -0.67
SPG11-201ENST00000261866 C1QL3Q5VWW1 255 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 BCL2L10Q9HD36 194 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 AUP1Q9Y679 476 aa10.86□□□□□ -0.67
SPG11-201ENST00000261866 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 UBE3DQ7Z6J8 389 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 KDF1Q8NAX2 398 aaPredicted RBP10.85□□□□□ -0.67
SPG11-201ENST00000261866 OR52N4Q8NGI2 321 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 RNF141Q8WVD5 230 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 CLDN23Q96B33 292 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 RND1Q92730 232 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 MN1Q10571 1320 aaPredicted RBP10.85□□□□□ -0.67
SPG11-201ENST00000261866 ASPDHA6ND91 283 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 NGFP01138 241 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 HBE1P02100 147 aa10.85□□□□□ -0.67
SPG11-201ENST00000261866 FABP1P07148 127 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms