RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TRIM36Q9NQ86 728 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 INPP5EQ9NRR6 644 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 MT-ND5P03915 603 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 MRPL3P09001 348 aaKnown RBP14.3□□□□□ -0.12
SDCBP-201ENST00000260130 CD99P14209 185 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 ARSBP15848 533 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 ELK1P19419 428 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 SLC6A9P48067 706 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 PRKXP51817 358 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 GNG2P59768 71 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 GRB2P62993 217 aaKnown RBP14.3□□□□□ -0.12
SDCBP-201ENST00000260130 GGTLC2Q14390 218 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 INSL4Q14641 139 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 Q5BKY6 102 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 IDNKQ5T6J7 187 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 GLCCI1Q86VQ1 547 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF525Q8N782 197 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 HAVCR1Q96D42 359 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 HAO2Q9NYQ3 351 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 PTTG3PQ9NZH4 202 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 LAMP5Q9UJQ1 280 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 C17orf100A8MU93 164 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 INMT-MINDY4F8WBC2 141 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 RAC2P15153 192 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 ALOX5APP20292 161 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 MMP15P51511 669 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 HCCSP53701 268 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 DSCR9P59020 149 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 BTG1P62324 171 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 MRPL28Q13084 256 aaKnown RBP14.3□□□□□ -0.12
SDCBP-201ENST00000260130 MAB21L1Q13394 359 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 CLEC2AQ6UVW9 174 aa14.3□□□□□ -0.12
SDCBP-201ENST00000260130 ISG20L2Q9H9L3 353 aaKnown RBP14.3□□□□□ -0.12
SDCBP-201ENST00000260130 PLSCR5A0PG75 271 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 DAPL1A0PJW8 107 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 HSD11B1P28845 292 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 HLXQ14774 488 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-201ENST00000260130 FBXW12Q6X9E4 464 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 CNN2Q99439 309 aaKnown RBP14.29□□□□□ -0.12
SDCBP-201ENST00000260130 CYSLTR2Q9NS75 346 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 CGGBP1Q9UFW8 167 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-201ENST00000260130 PURGQ9UJV8 347 aaKnown RBP14.29□□□□□ -0.12
SDCBP-201ENST00000260130 KLHDC2Q9Y2U9 406 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 TIMM8AO60220 97 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-201ENST00000260130 H2BFMP0C1H6 154 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 KITLGP21583 273 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF81P51508 661 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 MALLQ13021 153 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 GALEQ14376 348 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 TPRA1Q86W33 373 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF283Q8N7M2 679 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 C17orf50Q8WW18 174 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 RFT1Q96AA3 541 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 TMEM14AQ9Y6G1 99 aa14.29□□□□□ -0.12
SDCBP-201ENST00000260130 A0A0G2JMP0 313 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 A0A0X1KG70 313 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-201ENST00000260130 APOC1P02654 83 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 TAS2R43P59537 309 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 HACD4Q5VWC8 232 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 OR4M2Q8NGB6 313 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 GTF3AQ92664 365 aaKnown RBP14.28□□□□□ -0.12
SDCBP-201ENST00000260130 ADGRL4Q9HBW9 690 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 MYOZ1Q9NP98 299 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-201ENST00000260130 MCUBQ9NWR8 336 aa14.28□□□□□ -0.12
SDCBP-201ENST00000260130 DAOP14920 347 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 SLC6A1P30531 599 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 CX3CR1P49238 355 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 PCGF3Q3KNV8 242 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 SNAI3Q3KNW1 292 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 FAM168AQ92567 244 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 NKIRAS2Q9NYR9 191 aa14.27□□□□□ -0.12
SDCBP-201ENST00000260130 SBK2P0C263 348 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 SLC2A1P11166 492 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 MAGEB1P43366 347 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 PDLIM4P50479 330 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 GK2Q14410 553 aaPredicted RBP14.27□□□□□ -0.13
SDCBP-201ENST00000260130 OR2T2Q6IF00 324 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 KCTD18Q6PI47 426 aaPredicted RBP14.27□□□□□ -0.13
SDCBP-201ENST00000260130 LRRN1Q6UXK5 716 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 KRT77Q7Z794 578 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 OR10H4Q8NGA5 316 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 DEDD2Q8WXF8 326 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 ASB17Q8WXJ9 295 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 MNTQ99583 582 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 THAP7Q9BT49 309 aaPredicted RBP14.27□□□□□ -0.13
SDCBP-201ENST00000260130 DLL4Q9NR61 685 aa14.27□□□□□ -0.13
SDCBP-201ENST00000260130 FLNAP21333 2647 aaKnown RBP14.27□□□□□ -0.13
SDCBP-201ENST00000260130 IGHV4-30-2A0A087WSY4 118 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 LOC390937A0A1W2PQ73 354 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 ZSCAN5BA6NJL1 495 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 H7C1Q1 480 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 SPRY3O43610 288 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 PLPP2O43688 288 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 HPXP02790 462 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 PITPNBP48739 271 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 CCL8P80075 99 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 GPR176Q14439 515 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 DEGS2Q6QHC5 323 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms