RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MUC20Q8N307 709 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HMGCLL1Q8TB92 370 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BHQ93079 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BNQ99877 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H2BMQ99879 126 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 LMF2Q9BU23 707 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TNFRSF10CO14798 259 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HYAL3O43820 417 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 JMJD7P0C870 316 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GRPRP30550 384 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 FGF9P31371 208 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SFTPDP35247 375 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE2BQ13066 116 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TGIF1Q15583 401 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE2EQ4V326 116 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CCDC71LQ8N9Z2 235 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 OR51A2Q8NGJ7 313 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HAVCR2Q8TDQ0 301 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SUSD6Q92537 303 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 WDR34Q96EX3 536 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 PRAP1Q96NZ9 151 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SIGLEC11Q96RL6 698 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HAPLN2Q9GZV7 340 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC25A51Q9H1U9 297 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SEMA6CQ9H3T2 930 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 PRDM13Q9H4Q3 707 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM38AQ9H6F2 299 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE2DQ9UEU5 116 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 PLEKHB1Q9UF11 243 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GPR52Q9Y2T5 361 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 LDB2O43679 373 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CTSVO60911 334 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SPINK8P0C7L1 97 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HIST1H1DP16402 221 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SELEP16581 610 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC25A26Q70HW3 274 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CBLL1Q75N03 491 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC35E3Q7Z769 313 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4S2Q8NH73 311 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 OR5K2Q8NHB8 316 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 XAGE5Q8WWM1 108 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 MRGPRFQ96AM1 343 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ALG14Q96F25 216 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 RHNO1Q9BSD3 238 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 NRSN2Q9GZP1 204 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SRD5A3Q9H8P0 318 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HEXA-AS1Q9H8Q6 139 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 NRIP3Q9NQ35 241 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 C1QTNF3-AMACRE9PGA6 284 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HLA-DQB1P01920 261 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 C1QCP02747 245 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 MAS1P04201 325 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 KLK1P06870 262 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 MRPL3P09001 348 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 H2BFMP0C1H6 154 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ITGB7P26010 798 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 HTR1FP30939 366 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SSTR5P35346 364 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 UCP3P55916 312 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CRMP1Q14194 572 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TAS1R1Q7RTX1 841 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CISD2Q8N5K1 135 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 OR52I1Q8NGK6 324 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GPR148Q8TDV2 347 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM239Q8WW34 195 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 UBE2E3Q969T4 207 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 GPR174Q9BXC1 333 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 LTB4R2Q9NPC1 389 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CNIH4Q9P003 139 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 PPIL1Q9Y3C6 166 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SOD1P00441 154 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SDC1P18827 310 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 FUT1P19526 365 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CRYBB2P43320 205 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ATP1B3P54709 279 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 NCBP2-AS2Q69YL0 99 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF787Q6DD87 383 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 FBXW12Q6X9E4 464 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 RPS27LQ71UM5 84 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 CTU1Q7Z7A3 348 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ABHD4Q8TB40 342 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 LRRN4Q8WUT4 740 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 RTN4IP1Q8WWV3 396 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 NTNG2Q96CW9 530 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 RNF125Q96EQ8 232 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ALKBH3Q96Q83 286 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 ACER3Q9NUN7 267 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 SLCO1C1Q9NYB5 712 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 EHFQ9NZC4 300 aa6.08□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A1W2PPE3 182 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 FCN1O00602 326 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 ST8SIA3O43173 380 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 NEURL1O76050 574 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 ISG15P05161 165 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CA3P07451 260 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 IL1RNP18510 177 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CCR2P41597 374 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SNRPNP63162 240 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms