RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SEC14L6B5MCN3 397 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 UMAD1C9J7I0 102 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 GPR31O00270 319 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SRD5A2P31213 254 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 KLF3P57682 345 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-201ENST00000254630 H3F3AP84243 136 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 TIGITQ495A1 244 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 DMRTC1Q5HYR2 192 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 LCN15Q6UWW0 184 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM123Q8N131 208 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 DYNC2LI1Q8TCX1 351 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SPSB1Q96BD6 273 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 CMBLQ96DG6 245 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SLC6A13Q9NSD5 602 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 DHRS3O75911 302 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 LYZL6O75951 148 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 GALNSP34059 522 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF90Q03938 601 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 OR2T2Q6IF00 324 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 GALNT16Q8N428 558 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 OR4C16Q8NGL9 310 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 CMTM3Q96MX0 182 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 FAM103A1Q9BTL3 118 aaKnown RBP7.79□□□□□ -1.16
PTCD3-201ENST00000254630 GPR87Q9BY21 358 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 OR51I2Q9H344 312 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF71Q9NQZ8 489 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-201ENST00000254630 CLCF1Q9UBD9 225 aa7.79□□□□□ -1.16
PTCD3-201ENST00000254630 SNRPGP15A8MWD9 76 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 SLC31A2O15432 143 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 LIMS3P0CW19 117 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 LIMS4P0CW20 117 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 SULT1A3P0DMM9 295 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 SULT1A4P0DMN0 295 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 GLI4P10075 376 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 FOSL1P15407 271 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CBR1P16152 277 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 COX5AP20674 150 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 EVX1P49640 407 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 MNX1P50219 401 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-201ENST00000254630 MMP15P51511 669 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 GPNMBQ14956 572 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF141Q15928 474 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 TCTN1Q2MV58 587 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 MAMSTRQ6ZN01 415 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 FAM58AQ8N1B3 248 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CLEC18AA5D8T8 446 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 HOXB3P14651 431 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-201ENST00000254630 GABRB1P18505 474 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 BMP5P22003 454 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 FPR2P25090 351 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 DRD3P35462 400 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 WDR38Q5JTN6 314 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 TMEM108Q6UXF1 575 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 TMPRSS11FQ6ZWK6 438 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CLEC18CQ8NCF0 446 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 C14orf79Q96F83 325 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ACY3Q96HD9 319 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 OR2A5Q96R48 311 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 MAGT1Q9H0U3 335 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 RAB1BQ9H0U4 201 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 GLRX2Q9NS18 164 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 URGCP-MRPS24S4R325 110 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 DEFB108AA8MXU0 73 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 M0R1X1 148 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 LIMK1P53667 647 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 WNT3P56703 355 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 BTNL3Q6UXE8 466 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 LIMS2Q7Z4I7 341 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 OR5D13Q8NGL4 314 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 OR2T6Q8NHC8 308 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ASB13Q8WXK3 278 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 FBXW5Q969U6 566 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ZNF768Q9H5H4 540 aaKnown RBP7.78□□□□□ -1.16
PTCD3-201ENST00000254630 OR3A4PP47883 348 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 PABPC1L2AQ5JQF8 200 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 MOB1BQ7L9L4 216 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 LRRC29Q8WV35 223 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 LRFN3Q9BTN0 628 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 GAL3ST2Q9H3Q3 398 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 C12orf10Q9HB07 376 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ADGRL4Q9HBW9 690 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ZFP64Q9NPA5 681 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ANGPTL7O43827 346 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CDC14BO60729 498 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CT62P0C5K7 136 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CD82P27701 267 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 DCTDP32321 178 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 RAB7AP51149 207 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 OR13D1Q8NGV5 346 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ZNRF4Q8WWF5 429 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 TNFRSF19Q9NS68 423 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 C20orf141Q9NUB4 165 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 SIGLEC7Q9Y286 467 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 IGHV5-10-1A0A0J9YXX1 117 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 OR6C68A6NDL8 312 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 AQP8O94778 261 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 RRASP10301 218 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 CCL2P13500 99 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 ASCL1P50553 236 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 PRRX1P54821 245 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms