RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MCHR2Q969V1 340 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 MOB3AQ96BX8 217 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 TSPAN32Q96QS1 320 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 TMEFF2Q9UIK5 374 aaPredicted RBP16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 FOXL2P58012 376 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 OR2F1Q13607 317 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ETFDHQ16134 617 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 MSRB3Q8IXL7 192 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 LRFN3Q9BTN0 628 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 COX7A2P2O60397 106 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 POU2F2P09086 479 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 GALNT16Q8N428 558 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ALG14Q96F25 216 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 PPIHO43447 177 aaKnown RBP16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 CEACAM6P40199 344 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 MPPED2Q15777 294 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 CALHM3Q86XJ0 350 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 E5RGE8 158 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 LRRTM1Q86UE6 522 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF629Q9UEG4 869 aaPredicted RBP16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 NSG2Q9Y328 171 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 NDUFB3O43676 98 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 RBP4P02753 201 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 PABPC1L2AQ5JQF8 200 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 DTWD2Q8NBA8 298 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 PIGMQ9H3S5 423 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 ARRDC5A6NEK1 342 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 COX7A1P24310 79 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 CLDN20P56880 219 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 TRIP6Q15654 476 aaKnown RBP16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 C6orf201Q7Z4U5 140 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 C17orf78Q8N4C9 275 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 C2orf50Q96LR7 162 aa16.71■□□□□ 0.27
SMARCC1-201ENST00000254480 ACOT6Q3I5F7 207 aaPredicted RBP16.71■□□□□ 0.26
SMARCC1-201ENST00000254480 CADM4Q8NFZ8 388 aa16.71■□□□□ 0.26
SMARCC1-201ENST00000254480 CA5BP1Q8WTZ4 195 aa16.71■□□□□ 0.26
SMARCC1-201ENST00000254480 NKX2-2O95096 273 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 MRGPREQ86SM8 312 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNRF4Q8WWF5 429 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 MOGAT1Q96PD6 335 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 CCL4P13236 92 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 CDKN2AP42771 156 aaKnown RBP16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 OR3A4PP47883 348 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 MTCH2Q9Y6C9 303 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 SMCHD1A6NHR9 2005 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 TRAV17A0A0B4J275 112 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 K7EQS6 105 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 ARHGEF39Q8N4T4 335 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 CLDN23Q96B33 292 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 ADGRG7Q96K78 797 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 SLC35D1Q9NTN3 355 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 CLEC5AQ9NY25 188 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 KCNE1BA0A087WTH5 132 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 PATE3B3GLJ2 98 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 GPR31O00270 319 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 TPBGQ13641 420 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 KIAA0040Q15053 153 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 KISS1Q15726 138 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 LRRC10Q5BKY1 277 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 LYG1Q8N1E2 194 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 MISP3Q96FF7 219 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
SMARCC1-201ENST00000254480 RPS4XP62701 263 aaKnown RBP16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 THSD4Q6ZMP0 1018 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 SKA3Q8IX90 412 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNF251Q9BRH9 671 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 TIMM9Q9Y5J7 89 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 TPRP12270 2363 aaKnown RBP16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 TMEM272A0A1B0GTI8 110 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 SUMO3P55854 103 aaPredicted RBP16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 SLC37A1P57057 533 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 BTNL8Q6UX41 500 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 VN1R4Q7Z5H5 301 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 SRRQ9GZT4 340 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 WNT16Q9UBV4 365 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 KPTNQ9Y664 436 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 THBS4P35443 961 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 TAS2R45P59539 299 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 OR13D1Q8NGV5 346 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 FCGR3BO75015 233 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 EPPINO95925 133 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 IL5P05113 134 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 LFNGQ8NES3 379 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 GPBAR1Q8TDU6 330 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 GNPNAT1Q96EK6 184 aaPredicted RBP16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 SMIM7Q9BQ49 75 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 MBD1Q9UIS9 605 aaPredicted RBP16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 PSG11Q9UQ72 335 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 CRYABP02511 175 aaKnown RBP16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 WNT1P04628 370 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 SOX8P57073 446 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 C12orf73Q69YU5 71 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 IL20Q9NYY1 176 aa16.69■□□□□ 0.26
SMARCC1-201ENST00000254480 NGFP01138 241 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 C1QL3Q5VWW1 255 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 ACSM6Q6P461 480 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 ERRFI1Q9UJM3 462 aaPredicted RBP16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 SCN1AP35498 2009 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 IGLV3-16A0A075B6K0 115 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 HRKO00198 91 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms