RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SPSB4Q96A44 273 aa20.22■□□□□ 0.83
SYNGR3-201ENST00000248121 GP6Q9HCN6 339 aa20.22■□□□□ 0.83
SYNGR3-201ENST00000248121 KCNK7Q9Y2U2 307 aa20.22■□□□□ 0.83
SYNGR3-201ENST00000248121 CRTAPO75718 401 aaPredicted RBP20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 SCGNO76038 276 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 TPOP07202 933 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 CHRM2P08172 466 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 CCL2P13500 99 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 RAD52P43351 418 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 MECP2P51608 486 aaKnown RBP20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 TMEM50BP56557 158 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 OR8B8Q15620 311 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 CD276Q5ZPR3 534 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 NOXA1Q86UR1 476 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 CD163Q86VB7 1156 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 TNFAIP8L1Q8WVP5 186 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 MOV10Q9HCE1 1003 aaKnown RBP20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 ING3Q9NXR8 418 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 FAM215AQ9Y5M1 114 aa20.21■□□□□ 0.83
SYNGR3-201ENST00000248121 IGKV1-27A0A075B6S5 117 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 PYCARD-AS1I3L0S3 204 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 CXCL3P19876 107 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 ANXA7P20073 488 aaKnown RBP20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 OR3A2P47893 321 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 ZP1P60852 638 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 FBXW9Q5XUX1 488 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 TFAP2EQ6VUC0 442 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 CNEP1R1Q8N9A8 125 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 OR4S1Q8NGB4 309 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 OR10K1Q8NGX5 313 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 TINAGL1Q9GZM7 467 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 ING4Q9UNL4 249 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 A0A1B0GUH1 482 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 M0QYG6 137 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 SSX5O60225 188 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 TOXO94900 526 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 CD74P04233 296 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 CD79AP11912 226 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 KIR2DL2P43627 348 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 RBMS2Q15434 407 aaKnown RBP20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 TRAPPC6BQ86SZ2 158 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 CDH24Q86UP0 819 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 ZNF584Q8IVC4 421 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 GVQW1Q8N7I0 195 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 GHRLQ9UBU3 117 aa20.2■□□□□ 0.82
SYNGR3-201ENST00000248121 AHRRA9YTQ3 701 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 SMLR1H3BR10 107 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 COX5BP10606 129 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 RAB1AP62820 205 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 RPS27AP62979 156 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 FAM214BQ7L5A3 538 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 FAM89BQ8N5H3 189 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 WNT2BQ93097 391 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 SPSB1Q96BD6 273 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 SEC22CQ9BRL7 303 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 GINS4Q9BRT9 223 aa20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 ZNF107Q9UII5 783 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-201ENST00000248121 XRCC2O43543 280 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 PRAF2O60831 178 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 RAB3DO95716 219 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 CYB5AP00167 134 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 ZNF735P0CB33 412 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 MPGP29372 298 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 MAB21L1Q13394 359 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 HIKESHIQ53FT3 197 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 NSUN5P2Q63ZY6 315 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 OR1K1Q8NGR3 316 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 SNRNP40Q96DI7 357 aaKnown RBP20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 NPDC1Q9NQX5 325 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 C5orf49A4QMS7 147 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 FOXI3A8MTJ6 420 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 CCNOP22674 350 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 MTCP1P56278 107 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 CLVS2Q5SYC1 327 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 GLDNQ6ZMI3 551 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 NAXEQ8NCW5 288 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 BCL2L2Q92843 193 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 DACT3Q96B18 629 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 RAB3CQ96E17 227 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 CST11Q9H112 138 aa20.18■□□□□ 0.82
SYNGR3-201ENST00000248121 ZNF736B4DX44 427 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 RAD51DO75771 328 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 SULT1A3P0DMM9 295 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 SULT1A4P0DMN0 295 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 VSIG10L2P0DP72 767 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 HIST1H1DP16402 221 aaKnown RBP20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 MGMTP16455 207 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 IFITM2Q01629 132 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 SEZ6L2Q6UXD5 910 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 POM121L2Q96KW2 1035 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 ATRXP46100 2492 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 NRASP01111 189 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 C1QBP02746 253 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 SERPINA2P20848 420 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 RCVRNP35243 200 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 ARR3P36575 388 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 LIX1LQ8IVB5 337 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 ARHGAP5-AS1Q96IT6 56 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 ASF1BQ9NVP2 202 aa20.17■□□□□ 0.82
SYNGR3-201ENST00000248121 BOLA1Q9Y3E2 137 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms