RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TOX4O94842 621 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 IGHA1P01876 353 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 CSF1P09603 554 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 RPS27P42677 84 aaKnown RBP11.44□□□□□ -0.58
DDX39A-201ENST00000242776 ACTA2P62736 377 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 ACTG2P63267 376 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 SLC35A2P78381 396 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 FAM189A2Q15884 450 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 CORO6Q6QEF8 472 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 SCCPDHQ8NBX0 429 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 TBC1D15Q8TC07 691 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 LHX4Q969G2 390 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 TBX15Q96SF7 602 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 TBX5Q99593 518 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 JAM3Q9BX67 310 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 HDHD2Q9H0R4 259 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 TBCCD1Q9NVR7 557 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 FKBP14Q9NWM8 211 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 ATPIF1Q9UII2 106 aa11.44□□□□□ -0.58
DDX39A-201ENST00000242776 A0A0U1RQK1 487 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 CENPVL3A0A0U1RRI6 287 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF878C9JN71 531 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 J3QRE1 110 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 RER1O15258 196 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 RGS10O43665 173 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 ENSAO43768 121 aaKnown RBP11.43□□□□□ -0.58
DDX39A-201ENST00000242776 MRPS14O60783 128 aaKnown RBP11.43□□□□□ -0.58
DDX39A-201ENST00000242776 CLPXO76031 633 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 HLA-DPB1P04440 258 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 CDK1P06493 297 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 DBHP09172 617 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 ALOX5APP20292 161 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 CFHR2P36980 270 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 PMELP40967 661 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 SRP9P49458 86 aaKnown RBP11.43□□□□□ -0.58
DDX39A-201ENST00000242776 HIST1H3AP68431 136 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 EGR3Q06889 387 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 TAF13Q15543 124 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 C2orf68Q2NKX9 166 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 KCTD21Q4G0X4 260 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 HIST2H3PS2Q5TEC6 136 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 Q6ZPA2 131 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 HIST2H3AQ71DI3 136 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 VASH1Q7L8A9 365 aaPredicted RBP11.43□□□□□ -0.58
DDX39A-201ENST00000242776 FAM220AQ7Z4H9 259 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 KRT77Q7Z794 578 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 TMEM86BQ8N661 226 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 GATAD2BQ8WXI9 593 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 DYRK2Q92630 601 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 SLAMF6Q96DU3 332 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 ATF6BQ99941 703 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 ABHD6Q9BV23 337 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 ACOXLQ9NUZ1 547 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 COPS3Q9UNS2 423 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 POMT1Q9Y6A1 747 aa11.43□□□□□ -0.58
DDX39A-201ENST00000242776 A0A1W2PQL4 384 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-201ENST00000242776 LRRC30A6NM36 301 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-201ENST00000242776 MYL12BO14950 172 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 MLNRO43193 412 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 COX5BP10606 129 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 PSKH1P11801 424 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 IRF2P14316 349 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 GRB2P62993 217 aaKnown RBP11.42□□□□□ -0.58
DDX39A-201ENST00000242776 ECH1Q13011 328 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 GALEQ14376 348 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 BEAN1Q3B7T3 259 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 SFRP4Q6FHJ7 346 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF322Q6U7Q0 402 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-201ENST00000242776 CFAP77Q6ZQR2 320 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 PLEKHG7Q6ZR37 379 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 Q6ZSV7 163 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-201ENST00000242776 RNF133Q8WVZ7 376 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 COQ7Q99807 217 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 MROQ9BYG7 248 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 CCDC90BQ9GZT6 254 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 CENPMQ9NSP4 180 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 UFSP2Q9NUQ7 469 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 IKZF2Q9UKS7 526 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 SNX5Q9Y5X3 404 aa11.42□□□□□ -0.58
DDX39A-201ENST00000242776 OR6C6A6NF89 314 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 IFNL4K9M1U5 179 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 P2RY10O00398 339 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 KRT8P05787 483 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 H2BFMP0C1H6 154 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 HSD11B1P28845 292 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 RIDAP52758 137 aaKnown RBP11.41□□□□□ -0.58
DDX39A-201ENST00000242776 HCCSP53701 268 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 PRB3Q04118 309 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-201ENST00000242776 CCDC92Q53HC0 331 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-201ENST00000242776 PRAMEF6Q5VXH4 476 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 TMPRSS11AQ6ZMR5 421 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 PRSS48Q7RTY5 328 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF679Q8IYX0 411 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 SVOPQ8N4V2 548 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms